The kappa B transcriptional enhancer motif and signal sequences of V(D)J recombination are targets for the zinc finger protein HIVEP3/KRC: a site selection amplification binding study (Q24800100)

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English	The kappa B transcriptional enhancer motif and signal sequences of V(D)J recombination are targets for the zinc finger protein HIVEP3/KRC: a site selection amplification binding study	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

4 July 2017

The kappa B transcriptional enhancer motif and signal sequences of V(D)J recombination are targets for the zinc finger protein HIVEP3/KRC: a site selection amplification binding study (English)

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

author name string

Carl E Allen

1

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

Chi-ho Mak

2

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Europe PubMed Central

PubMed publication ID

4 July 2017

Lai-Chu Wu

3

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Europe PubMed Central

PubMed publication ID

4 July 2017

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publication date

22 August 2002

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Europe PubMed Central

PubMed publication ID

4 July 2017

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Europe PubMed Central

PubMed publication ID

4 July 2017

3

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Europe PubMed Central

PubMed publication ID

4 July 2017

1

0 references

10

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

Activation of somatostatin receptor II expression by transcription factors MIBP1 and SEF-2 in the murine brain

1 reference

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7 April 2017

Transcription factor PRDII-BF1 activates human immunodeficiency virus type 1 gene expression

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7 April 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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7 April 2017

Multiple nuclear factors interact with the immunoglobulin enhancer sequences

1 reference

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7 April 2017

Two genes encode factors with NF-kappa B- and H2TF1-like DNA-binding properties

1 reference

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7 April 2017

A large protein containing zinc finger domains binds to related sequence elements in the enhancers of the class I major histocompatibility complex and kappa immunoglobulin genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

7 April 2017

A DNA-binding protein containing two widely separated zinc finger motifs that recognize the same DNA sequence

1 reference

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7 April 2017

HIV-EP2, a new member of the gene family encoding the human immunodeficiency virus type 1 enhancer-binding protein. Comparison with HIV-EP1/PRDII-BF1/MBP-1

1 reference

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7 April 2017

Regulation of human immunodeficiency virus enhancer function by PRDII-BF1 and c-rel gene products

1 reference

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7 April 2017

Structure and expression of major histocompatibility complex-binding protein 2, a 275-kDa zinc finger protein that binds to an enhancer of major histocompatibility complex class I genes

1 reference

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7 April 2017

Basonuclin: a keratinocyte protein with multiple paired zinc fingers

1 reference

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7 April 2017

The crystal structure of a two zinc-finger peptide reveals an extension to the rules for zinc-finger/DNA recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

7 April 2017

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

1 reference

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7 April 2017

A comprehensive set of sequence analysis programs for the VAX

1 reference

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7 April 2017

Three classes of C2H2 zinc finger proteins

1 reference

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7 April 2017

A zinc finger transcription factor, alphaA-crystallin binding protein 1, is a negative regulator of the chondrocyte-specific enhancer of the alpha1(II) collagen gene

1 reference

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7 April 2017

Combining evidence using p-values: application to sequence homology searches

1 reference

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7 April 2017

Isolation and Structure of the COL4A6 Gene Encoding the Human α6(IV) Collagen Chain and Comparison with Other Type IV Collagen Genes

1 reference

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7 April 2017

Developmentally controlled and tissue-specific expression of unrearranged VH gene segments

1 reference

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7 April 2017

Embryonic expression and regulation of the large zinc finger protein KRC

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

7 April 2017

Molecular cloning of an enhancer binding protein: isolation by screening of an expression library with a recognition site DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

7 April 2017

ZAS: C2H2 zinc finger proteins involved in growth and development

1 reference

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28 September 2017

The DNA-binding ability of HIVEP3/KRC decreases upon activation of V(D)J recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

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New steroid 5alpha-reductase type I (SRD5A1) homologous sequences on human chromosomes 6 and 8.

1 reference

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Basic helix-loop-helix proteins E2A and HEB induce immature T-cell receptor rearrangements in nonlymphoid cells.

1 reference

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28 September 2017

The transcription factor Schnurri plays a dual role in mediating Dpp signaling during embryogenesis.

1 reference

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28 September 2017

Structure of the human zinc finger protein HIVEP3: molecular cloning, expression, exon-intron structure, and comparison with paralogous genes HIVEP1 and HIVEP2.

1 reference

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Intermediate filaments reconstituted from vimentin, desmin, and glial fibrillary acidic protein selectively bind repetitive and mobile DNA sequences from a mixture of mouse genomic DNA fragments

1 reference

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28 September 2017

The zinc finger protein schnurri acts as a Smad partner in mediating the transcriptional response to decapentaplegic.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

B-cell repertoire formation: role of the recombination signal sequence in non-random V segment utilization

1 reference

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28 September 2017

Recombination signal sequences restrict chromosomal V(D)J recombination beyond the 12/23 rule.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

The kappaB and V(D)J recombination signal sequence binding protein KRC regulates transcription of the mouse metastasis-associated gene S100A4/mts1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

The role of components of recombination signal sequences in immunoglobulin gene segment usage: a V81x model.

1 reference

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28 September 2017

Regulation of V(D)J recombination by transcriptional promoters

1 reference

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28 September 2017

Decreased frequency of rearrangement due to the synergistic effect of nucleotide changes in the heptamer and nonamer of the recombination signal sequence of the V kappa gene A2b, which is associated with increased susceptibility of Navajos to Haemop

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

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1 reference

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28 September 2017

The role of recombination signal sequences in the preferential joining by deletion in DH-JH recombination and in the ordered rearrangement of the IgH locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

Immunoglobulin D(H) recombination signal sequence targeting: effect of D(H) coding and flanking regions and recombination partner

1 reference

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28 September 2017

The mouse DNA binding protein Rc for the kappa B motif of transcription and for the V(D)J recombination signal sequences contains composite DNA-protein interaction domains and belongs to a new family of large transcriptional proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

Molecular cloning of a zinc finger protein which binds to the heptamer of the signal sequence for V(D)J recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

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The V(D)J recombination signal sequence and kappa B binding protein Rc binds DNA as dimers and forms multimeric structures with its DNA ligands

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28 September 2017

Cloning and characterization of a c-myc intron binding protein (MIBP1).

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28 September 2017

Murine transcription factor alpha A-crystallin binding protein I. Complete sequence, gene structure, expression, and functional inhibition via antisense RNA.

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28 September 2017

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1 reference

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28 September 2017

Nonproductive kappa immunoglobulin genes: recombinational abnormalities and other lesions affecting transcription, RNA processing, turnover, and translation

1 reference

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28 September 2017

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1 reference

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28 September 2017

Identification of a functional NF-kappa B binding site in the murine T cell receptor beta 2 locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

Putative metal finger structure of the human immunodeficiency virus type 1 enhancer binding protein HIV-EP1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

Zinc proteins: enzymes, storage proteins, transcription factors, and replication proteins

1 reference

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28 September 2017

Essential residues in V(D)J recombination signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 September 2017

Accessibility and the developmental regulation of V(D)J recombination

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

30 May 2018

Two pairs of recombination signals are sufficient to cause immunoglobulin V-(D)-J joining

1 reference

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30 May 2018

Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes

1 reference

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28 November 2018

KRC transcripts: identification of an unusual alternative splicing event

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28 November 2018

Schnurri is required for Drosophila Dpp signaling and encodes a zinc finger protein similar to the mammalian transcription factor PRDII-BF1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 November 2018

The Drosophila schnurri gene acts in the Dpp/TGF beta signaling pathway and encodes a transcription factor homologous to the human MBP family

1 reference

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28 November 2018

A Drosophila protein related to the human zinc finger transcription factor PRDII/MBPI/HIV-EP1 is required for dpp signaling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122077

28 November 2018

Human immunoglobulin D segments encoded in tandem multigenic families

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28 November 2018

Complex MLL rearrangement in a patient with T-cell acute lymphoblastic leukemia

1 reference

https://pubmed.ncbi.nlm.nih.gov/12193271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A kappaB-related binding site is an integral part of the mts1 gene composite enhancer element located in the first intron of the gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/12193271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Templated nucleotide addition and immunoglobulin JH-gene utilization in t(11;14) junctions: implications for the mechanism of translocation and the origin of mantle cell lymphoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/12193271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bending of DNA by gene-regulatory proteins: construction and use of a DNA bending vector

1 reference

https://pubmed.ncbi.nlm.nih.gov/12193271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1186/1471-2172-3-10

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Europe PubMed Central

PubMed publication ID

4 July 2017

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

ResearchGate publication ID

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