(Q27931804)

1 December 2016

title

Uniform transitions of the general RNA polymerase II transcription complex (English)

1 reference

PubMed

PubMed publication ID

1 December 2016

1 reference

GOA release 2020-03-11

Elf1p YKL160W

1 reference

Chromatin-remodeling histone chaperone SPT6 YGR116W

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

author

Johannes Söding

5

0 references

Andreas Mayer

object named as

Andreas Mayer

1

0 references

Patrick Cramer

6

object named as

Patrick Cramer

0 references

author name string

Michael Lidschreiber

2

0 references

Matthias Siebert

3

0 references

Kristin Leike

Nature Structural & Molecular Biology

4

0 references

language of work or name

English

0 references

publication date

October 2010

0 references

published in

1 reference

PubMed

PubMed publication ID

20818391

Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo

1 December 2016

volume

17

0 references

issue

10

0 references

page(s)

1272-8

0 references

cites work

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

The transcriptional landscape of the yeast genome defined by RNA sequencing

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Structure and in vivo requirement of the yeast Spt6 SH2 domain

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

RNA polymerase II-TFIIB structure and mechanism of transcription initiation

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

A highly purified RNA polymerase II elongation control system

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7.

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

TFIIH kinase places bivalent marks on the carboxy-terminal domain of RNA polymerase II.

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Phosphorylation of the RNA polymerase II carboxy-terminal domain by the Bur1 cyclin-dependent kinase

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

c-Myc regulates transcriptional pause release

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Identification and characterization of Elf1, a conserved transcription elongation factor in Saccharomyces cerevisiae

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Phosphorylation of the Pol II CTD by KIN28 enhances BUR1/BUR2 recruitment and Ser2 CTD phosphorylation near promoters

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Control of transcriptional elongation and cotranscriptional histone modification by the yeast BUR kinase substrate Spt5.

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

BUR kinase selectively regulates H3 K4 trimethylation and H2B ubiquitylation through recruitment of the PAF elongation complex

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

The FACT Spt16 “peptidase” domain is a histone H3–H4 binding module

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

FACT facilitates transcription-dependent nucleosome alteration

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Bur1 kinase is required for efficient transcription elongation by RNA polymerase II.

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Interaction between transcription elongation factors and mRNA 3'-end formation at the Saccharomyces cerevisiae GAL10-GAL7 locus.

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Transcription elongation factors repress transcription initiation from cryptic sites.

20 April 2017

1 reference

https://api.crossref.org/works/10.1038/NSMB.1903

Progression through the RNA polymerase II CTD cycle

20 April 2017

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Bidirectional promoters generate pervasive transcription in yeast

20 April 2017

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Transitions in RNA polymerase II elongation complexes at the 3' ends of genes

20 April 2017

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

RNA polymerase II elongation through chromatin

20 April 2017

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

A unified theory of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Dynamic association of capping enzymes with transcribing RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

"Cotranscriptionality": the transcription elongation complex as a nexus for nuclear transactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

A structural perspective of CTD function

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

A high-resolution map of transcription in the yeast genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Genome-associated RNA polymerase II includes the dissociable Rpb4/7 subcomplex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

RNA polymerase II C-terminal heptarepeat domain Ser-7 phosphorylation is established in a mediator-dependent fashion

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Phosphorylation of the transcription elongation factor Spt5 by yeast Bur1 kinase stimulates recruitment of the PAF complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Multiple C-terminal lysine residues target p53 for ubiquitin-proteasome-mediated degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Nucleosome positioning and gene regulation: advances through genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Core structure of the yeast spt4-spt5 complex: a conserved module for regulation of transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Ctk1 promotes dissociation of basal transcription factors from elongating RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3' end processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Genome-scale identification of nucleosome positions in S. cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Extensive chromatin fragmentation improves enrichment of protein binding sites in chromatin immunoprecipitation experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Quantitative analysis of in vivo initiator selection by yeast RNA polymerase II supports a scanning model

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

Kin28, the TFIIH-associated carboxy-terminal domain kinase, facilitates the recruitment of mRNA processing machinery to RNA polymerase II.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1903

RNA polymerase II and the integration of nuclear events

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20818391