(Q27931868)

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

title

Interaction between transcription elongation factors and mRNA 3'-end formation at the Saccharomyces cerevisiae GAL10-GAL7 locus (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

Chromatin-remodeling histone chaperone SPT6 YGR116W

4 January 2020

main subject

Saccharomyces cerevisiae

0 references

1 reference

Transcription elongation factor DST1 YGL043W

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

Ctr9p YOL145C

1 reference

GOA release 2020-03-11

author

Craig D. Kaplan

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

author name string

Michael J Holland

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

Fred Winston

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

language of work or name

English

0 references

publication date

5 November 2004

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

4 January 2020

published in

2 references

PubMed

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

volume

280

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

page(s)

913-922

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

Transcript elongation on a nucleoprotein template

4 January 2020

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

RNA polymerase II conducts a symphony of pre-mRNA processing activities

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Transcriptional elongation control by RNA polymerase II: a new frontier

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The RNA polymerase II elongation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Transcriptional elongation by RNA polymerase II and histone methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Tails of intrigue: phosphorylation of RNA polymerase II mediates histone methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The histone 3 lysine 36 methyltransferase, SET2, is involved in transcriptional elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Phosphorylation of RNA polymerase II CTD regulates H3 methylation in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

ISWI complexes in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Methylation of histone H3 K4 mediates association of the Isw1p ATPase with chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Isw1 chromatin remodeling ATPase coordinates transcription elongation and termination by RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The Paf1 complex physically and functionally associates with transcription elongation factors in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Spt5 and spt6 are associated with active transcription and have characteristics of general elongation factors in D. melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

High-resolution localization of Drosophila Spt5 and Spt6 at heat shock genes in vivo: roles in promoter proximal pausing and transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Human Spt6 stimulates transcription elongation by RNA polymerase II in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Evidence that Spt4, Spt5, and Spt6 control transcription elongation by RNA polymerase II in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Transcription elongation factors repress transcription initiation from cryptic sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Evidence that Spt6p controls chromatin structure by a direct interaction with histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Functional interaction between pleiotropic transactivator pUL69 of human cytomegalovirus and the human homolog of yeast chromatin regulatory protein SPT6

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The RNA processing exosome is linked to elongating RNA polymerase II in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Ctr9, Rtf1, and Leo1 are components of the Paf1/RNA polymerase II complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Molecular evidence indicating that the yeast PAF complex is required for transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Transitions in RNA polymerase II elongation complexes at the 3' ends of genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The Rtf1 component of the Paf1 transcriptional elongation complex is required for ubiquitination of histone H2B.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Integrating mRNA processing with transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Regulation of transcription elongation by phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The RNA polymerase II CTD kinase CTDK-I affects pre-mRNA 3' cleavage/polyadenylation through the processing component Pti1p

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3' end processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Intron status and 3'-end formation control cotranscriptional export of mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Ssu72 protein mediates both poly(A)-coupled and poly(A)-independent termination of RNA polymerase II transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

A role for SSU72 in balancing RNA polymerase II transcription elongation and termination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Evolutionarily conserved interaction between CstF-64 and PC4 links transcription, polyadenylation, and termination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The SPT6 gene is essential for growth and is required for delta-mediated transcription in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

RNA polymerase II subunit composition, stoichiometry, and phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Poly(A) signals control both transcriptional termination and initiation between the tandem GAL10 and GAL7 genes of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

SPT5, an essential gene important for normal transcription in Saccharomyces cerevisiae, encodes an acidic nuclear protein with a carboxy-terminal repeat

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Transcript quantitation in total yeast cellular RNA using kinetic PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Analysis of gene induction and arrest site transcription in yeast with mutations in the transcription elongation machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Requirement of yeast RAD2, a homolog of human XPG gene, for efficient RNA polymerase II transcription. implications for Cockayne syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Requirement for yeast RAD26, a homolog of the human CSB gene, in elongation by RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The helix-hairpin-helix DNA-binding motif: a structural basis for non-sequence-specific recognition of DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Yeast RAD26, a homolog of the human CSB gene, functions independently of nucleotide excision repair and base excision repair in promoting transcription through damaged bases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The organization and transcription of the galactose gene cluster of Saccharomyces

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

A role for Ctr9p and Paf1p in the regulation G1 cyclin expression in yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Mutations in the second largest subunit of RNA polymerase II cause 6-azauracil sensitivity in yeast and increased transcriptional arrest in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Mutations in RNA polymerase II and elongation factor SII severely reduce mRNA levels in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Saccharomyces cerevisiae transcription elongation mutants are defective in PUR5 induction in response to nucleotide depletion

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

In Vivo Evidence that Defects in the Transcriptional Elongation Factors RPB2, TFIIS, and SPT5 Enhance Upstream Poly(A) Site Utilization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

The Paf1 complex has functions independent of actively transcribing RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Balancing transcriptional interference and initiation on the GAL7 promoter of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Recognition of RNA polymerase II carboxy-terminal domain by 3'-RNA-processing factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Independent functions of yeast Pcf11p in pre-mRNA 3' end processing and in transcription termination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Recognition of polyadenylation sites in yeast pre-mRNAs by cleavage and polyadenylation factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

Elongator, a Multisubunit Component of a Novel RNA Polymerase II Holoenzyme for Transcriptional Elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M411108200

21 January 2018

Identifiers

DOI

10.1074/JBC.M411108200

2 references

Consolidated OpenCitations Corpus – April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15531585%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

1 reference

Consolidated OpenCitations Corpus – April 2017

2 references

Consolidated OpenCitations Corpus – April 2017