(Q37157318)

18 August 2017

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting (English)

1 reference

18 August 2017

5

1 reference

18 August 2017

John Stamatoyannopoulos

12

object named as

John A Stamatoyannopoulos

1 reference

18 August 2017

Jay R Hesselberth

1

1 reference

18 August 2017

Xiaoyu Chen

2

1 reference

18 August 2017

Zhihong Zhang

3

1 reference

18 August 2017

Peter J Sabo

4

1 reference

18 August 2017

Alex P Reynolds

6

1 reference

18 August 2017

Robert E Thurman

7

1 reference

18 August 2017

Shane Neph

8

1 reference

18 August 2017

Michael S Kuehn

9

1 reference

18 August 2017

William S Noble

10

1 reference

18 August 2017

Stanley Fields

11

1 reference

18 August 2017

22 March 2009

1 reference

18 August 2017

1 reference

18 August 2017

6

1 reference

18 August 2017

4

1 reference

18 August 2017

283-289

1 reference

Nucleosome retention and the stochastic nature of promoter chromatin remodeling for transcription

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

A high-resolution atlas of nucleosome occupancy in yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Divergence of transcription factor binding sites across related yeast species

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Genome-wide mapping of in vivo protein-DNA interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

A high-resolution map of transcription in the yeast genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

An improved map of conserved regulatory sites for Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

A global map of p53 transcription-factor binding sites in the human genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Genome-scale identification of nucleosome positions in S. cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Transcriptional regulatory code of a eukaryotic genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Sequencing and comparison of yeast species to identify genes and regulatory elements

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Genome-wide location and function of DNA binding proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Positive and negative autoregulation of REB1 transcription in Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Crystal structure of the yeast MATalpha2/MCM1/DNA ternary complex

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

DNA-binding specificity of Mcm1: operator mutations that alter DNA-bending and transcriptional activities by a MADS box protein

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Structure and function of the b/HLH/Z domain of USF

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Nuclease hypersensitive sites in chromatin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

In vivo protein-DNA interactions at hypersensitive site 3 of the human beta-globin locus control region

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

DNAase footprinting a simple method for the detection of protein-DNA binding specificity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Constitutive binding of yeast heat shock factor to DNA in vivo

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Global regulators of ribosome biosynthesis in yeast

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2668528

Structure of the λ Operators

3 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19305407

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NMETH.1313

1 reference

18 August 2017

1 reference

18 August 2017

PubMed publication ID

19305407

1 reference