A practical approach to adjusting for population stratification in genome-wide association studies: principal components and propensity scores (PCAPS) (Q90210919)

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scientific article published on 04 December 2018

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English	A practical approach to adjusting for population stratification in genome-wide association studies: principal components and propensity scores (PCAPS)	scientific article published on 04 December 2018

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scholarly article

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12 April 2020

A practical approach to adjusting for population stratification in genome-wide association studies: principal components and propensity scores (PCAPS) (English)

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12 April 2020

genome-wide association study

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1

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12 April 2020

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Nandita Mitra

2

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12 April 2020

Peter A Kanetsky

3

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12 April 2020

Katherine L Nathanson

4

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12 April 2020

Timothy R Rebbeck

5

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12 April 2020

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4 December 2018

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12 April 2020

Statistical Applications in Genetics and Molecular Biology

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12 April 2020

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12 April 2020

6

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12 April 2020

maintained by WikiProject

WikiProject Mathematics

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Association mapping in structured populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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Genomic control for association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of logistic regression versus propensity score when the number of events is low and there are multiple confounders

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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Stratification and weighting via the propensity score in estimation of causal treatment effects: a comparative study

1 reference

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12 December 2020

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Confounding from cryptic relatedness in case-control association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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Principal components analysis corrects for stratification in genome-wide association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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Genetic relatedness analysis: modern data and new challenges

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12 December 2020

based on heuristic

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Population structure and eigenanalysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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A simple and improved correction for population stratification in case-control studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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PLINK: a tool set for whole-genome association and population-based linkage analyses

1 reference

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12 December 2020

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GWAsimulator: a rapid whole-genome simulation program

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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Improved correction for population stratification in genome-wide association studies by identifying hidden population structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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A unified association analysis approach for family and unrelated samples correcting for stratification.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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On the use of general control samples for genome-wide association studies: genetic matching highlights causal variants

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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Genetic background comparison using distance-based regression, with applications in population stratification evaluation and adjustment

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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A propensity score approach to correction for bias due to population stratification using genetic and non-genetic factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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Discovering genetic ancestry using spectral graph theory

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Common variation in KITLG and at 5q31.3 predisposes to testicular germ cell cancer

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A method to correct for population structure using a segregation model

1 reference

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12 December 2020

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Assessing the impact of global versus local ancestry in association studies

1 reference

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12 December 2020

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Comparison of methods for correcting population stratification in a genome-wide association study of rheumatoid arthritis: principal-component analysis versus multidimensional scaling

1 reference

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12 December 2020

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Score-based adjustment for confounding by population stratification in genetic association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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Variance component model to account for sample structure in genome-wide association studies

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12 December 2020

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Mixed linear model approach adapted for genome-wide association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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Quantification of population structure using correlated SNPs by shrinkage principal components

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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New approaches to population stratification in genome-wide association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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Accounting for population stratification in practice: a comparison of the main strategies dedicated to genome-wide association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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Correcting for Population Stratification in Genomewide Association Studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

based on heuristic

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Stratification-score matching improves correction for confounding by population stratification in case-control association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30507552

12 December 2020

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Adjustment for population stratification via principal components in association analysis of rare variants

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12 December 2020

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Analyzing genetic association studies with an extended propensity score approach

1 reference

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12 December 2020

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Robust methods for population stratification in genome wide association studies

1 reference

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1 reference

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Principal component regression and linear mixed model in association analysis of structured samples: competitors or complements?

1 reference

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Global Individual Ancestry Using Principal Components for Family Data

1 reference

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12 December 2020

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Control for Population Structure and Relatedness for Binary Traits in Genetic Association Studies via Logistic Mixed Models

1 reference

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12 December 2020

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An evaluation of bias in propensity score-adjusted non-linear regression models

1 reference

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A novel association test for multiple secondary phenotypes from a case-control GWAS.

1 reference

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Identifiers

10.1515/SAGMB-2017-0054

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30507552%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

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Europe PubMed Central

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12 April 2020

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12 April 2020

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