The Structure of Ribosomal RNA and Its Organization Relative to Ribosomal Protein (Q40154482)

18 September 2017

1 reference

title

The structure of ribosomal RNA and its organization relative to ribosomal protein (English)

1 reference

18 September 2017

The Structure of Ribosomal RNA and Its Organization Relative to Ribosomal Protein (English)

1 reference

10.1016/S0079-6603(08)60081-1

DOI

https://api.crossref.org/works/10.1016/S0079-6603(08)60081-1

4 October 2023

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A6348873

4 October 2023

author name string

R. Brimacombe

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A6348873

4 October 2023

P. Maly

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A6348873

4 October 2023

C. Zwieb

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A6348873

4 October 2023

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=6348873

4 October 2023

publication date

1 January 1983

1 reference

Progress in Molecular Biology and Translational Science

18 September 2017

published in

1 reference

18 September 2017

volume

28

1 reference

18 September 2017

page(s)

1-48

1 reference

A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase

18 September 2017

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‘2 S’ RNA, A new ribosomal RNA component in culturedDrosophilacells

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Sequence of the intron and flanking exons of the mitochondrial 21S rRNA gene of yeast strains having different alleles at the ω and rib-1 loci

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Sequence of a ribosomal RNA gene intron from Tetrahymena

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The rDNA of Drosophila melanogaster

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Collection of published 5S and 5.8S rRNA sequences and their precursors

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Collection of published 5S and 5.8S RNA sequences and their precursors

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7 January 2021

An archaebacterial 5S rRNA contains a long insertion sequence

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7 January 2021

Sequence and secondary structure of Drosophila melanogaster 5.8S and 2S rRNAs and of the processing site between them

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7 January 2021

The nucleotide sequence of the large ribosomal RNA gene and the adjacent tRNA genes from rat mitochondria

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7 January 2021

Nucleotide sequence of the Aspergillus nidulans mitochondria! gene coding for the small ribosomal subunit RNA: homology to E. coli 16S rRNA

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7 January 2021

Structure and sequence of the mitochondrial 20S rRNA and tRNA tyr gene of Paramecium primaurelia

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7 January 2021

Primary and secondary structures of Escherichia coli MRE 600 23S ribosomal RNA. Comparison with models of secondary structure for maize chloroplast 23S rRNA and for large portions of mouse and human 16S mitochondrial rRNAs

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7 January 2021

The sequence of the ribosomal 16S RNA from Proteus vulgaris. Sequence comparison with E. coli 16S RNA and its use in secondary model building

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7 January 2021

Secondary structure of 16S ribosomal RNA.

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7 January 2021

Secondary structure model for 23S ribosomal RNA.

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7 January 2021

Nucleotide sequence of aEuglena gradlischloroplast gene coding for the 16S rRNA: homologies toE. coliandZea mayschloroplast 16S rRNA

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7 January 2021

The primary and secondary structure of yeast 26S rRNA

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7 January 2021

Fine structure of ribosomal RNA. IV. Extraordinary evolutionary conservation in sequences that flank introns in rDNA

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7 January 2021

The 3'-terminal primary structure of five eukaryotic 18S rRNAs determined by the direct chemical method of sequencing. The highly conserved sequences include an invariant region complementary to eukaryotic 5S rRNA.

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Sequence, modified nucleotides and secondary structure at the 3′-end of small ribosomal subunit RNA

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Structure analysis at the ends of the intervening DNA sequences in the chloroplast 23S ribosomal genes of C. reinhardii

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7 January 2021

Splice point sequence and transcripts of the intervening sequence in the mitochondrial 21S ribosomal RNA gene of yeast

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7 January 2021

The 10kb Drosophila virus 28S rDNA intervening sequence is flanked by a disect repeat of 14 base pairs of coding sequence

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7 January 2021

Nucleotide sequences at the boundaries between gene and insertion regions in the rDNA of Drosophila melanogaster

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Duplicated rDNA sequences of variable lengths flanking the short type I insertions in the rDNA of Drosophila melanogaster

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7 January 2021

Nucleotide sequence of a ribosomal RNA gene intron from slime mold Physarum polycephalum

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7 January 2021

Nucleotide sequence of the ribosomal RNA gene of Physarum polycephalum: intron 2 and its flanking regions of the 26S rRNA gene

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7 January 2021

Mitochondrial tRNA gene clusters in Aspergillus nidulans: organization and nucleotide sequence

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7 January 2021

Sequencing of 16S--23S spacer in a ribosomal RNA operon of Euglena gracilis chloroplast DNA reveals two tRNA genes

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7 January 2021

The 3′-terminal region of bacterial 23S ribosomal RNA: structure and homology with the 3′-terminal region of eukaryotic 28S rRNA and with chloroplast 4.5S rRNA

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7 January 2021

The phylogeny of prokaryotes

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7 January 2021

The Complete Nucleotide Sequence of the Ribosomal 16-S RNA from Escherichia coli. Experimental Details and Cistron Heterogeneities

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7 January 2021

Methylated regions of hamster mitochondrial ribosomal RNA: structural and functional correlates

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7 January 2021

Analysis of the Methylation Sites in Yeast Ribosomal RNA

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7 January 2021

Methylation map of Xenopus laevis ribosomal RNA

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7 January 2021

Free energy of imperfect nucleic acid helices. 3. Small internal loops resulting from mismatches.

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7 January 2021

Stability of ribonucleic acid double-stranded helices

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7 January 2021

Thermodynamics of a stable yeast 5.8S rRNA hairpin helix

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7 January 2021

Computer method for predicting the secondary structure of single-stranded RNA

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7 January 2021

Fast algorithm for predicting the secondary structure of single-stranded RNA

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7 January 2021

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

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7 January 2021

Secondary structure model for the complete simian virus 50 late precursor mRNA

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7 January 2021

Computer-aided prediction of RNA secondary structures

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7 January 2021

Secondary structure of Bombyx mori and Dictyostelium discoideum 5S rRNA from S1 nuclease and cobra venom ribonuclease susceptibility, and computer assisted analysis

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7 January 2021

Secondary structure model for bacterial 16S ribosomal RNA: phylogenetic, enzymatic and chemical evidence

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7 January 2021

Chemical probes for higher-order structure in RNA

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7 January 2021

Accessibility of Escherichia coli 5S RNA base residues to chemical reagents. Influence of chemical alterations on the affinity of 5S RNA for the 50S subunit structure

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7 January 2021

Reaction of 5 s RNA with a radioactive carbodiimide

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7 January 2021

Topography of 16 S RNA in 30 S subunits and 70 S ribosomes accessibility to cobra venom ribonuclease

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7 January 2021

Derivation of the Secondary Structure of 5S RNA from its Binding of Complementary Oligonucleotides

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7 January 2021

Binding oligonucleotides to Escherichia coli and Bacillus stearothermophilus 5 S RNA

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7 January 2021

Experimental determination of interacting sequences in ribosomal RNA

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7 January 2021

An experimentally-derived model for the secondary structure of the 16S ribosomal RNA from Escherichia coli

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7 January 2021

A new RNA-RNA crosslinking reagent and its application to ribosomal 5S RNA.

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7 January 2021

Localisation of a series of intra-RNA cross-links in 16S RNA, induced by ultraviolet irradiation of Escberichia coli 30S ribosomal subunits

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7 January 2021

5S RNA secondary structure

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7 January 2021

The secondary structure of E. coli ribosomes and ribosomal RNA's: a spearophotometric approach

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7 January 2021

A unique secondary folding pattern for 5S RNA corresponds to the lowest energy homologous secondary structure in 17 different prokaryotes

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7 January 2021

Three-dimensional structural model of eubacterial 5S RNA that has functional implications

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7 January 2021

A structural model of 5S RNA from E. coli based on intramolecular crosslinking evidence.

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7 January 2021

An unusual 5S rRNA, from Sulfolobus acidocaldarius, and its implications for a general 5S rRNA structure

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7 January 2021

Structural organization of the 16S ribosomal RNA from E. coli. Topography and secondary structure

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7 January 2021

Secondary structure of the large subunit ribosomal RNA from Escherichia coli, Zea mays chloroplast, and human and mouse mitochondrial ribosomes

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7 January 2021

Secondary structure comparisons between small subunit ribosomal RNA molecules from six different species

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7 January 2021

The topography of the 5' end of 16-S RNA in the presence and absence of ribosomal proteins S4 and S20.

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7 January 2021

A General Secondary-Structure Model for Procaryotic and Eucaryotic RNAs of the Small Ribosomal Subunits

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7 January 2021

Modification of 18 S rRNA in the 40 S ribosomal subunit of yeast with dimethyl sulfate

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7 January 2021

Evolution of rRNA and origin of mitochondria

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7 January 2021

A 5.8 S rRNA-like sequence in prokaryotic 23 S rRNA

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7 January 2021

Structure of the 5.8S RNA component of the 5.8S-28S ribosomal RNA junction complex

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7 January 2021

Ribosomal RNA evolution by fragmentation of the 23S progenitor: Maturation pathway parallels evolutionary emergence

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7 January 2021

Characterization of a new low molecular weight RNA in HeLa cell ribosomes

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7 January 2021

Small molecular weight monodisperse nuclear RNA

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7 January 2021

Role of the 5'-terminal sequence in the RNA binding site of yeast 5.8 S rRNA.

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7 January 2021

The nucleotide sequence at the 3'-end of Neurospora crassa 25S-rRNA and the location of a 5.8S-rRNA binding site

1 reference

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7 January 2021

Does 5S RNA function by a switch between two secondary structures?

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7 January 2021

A ribonucleoprotein fragment of the 30 S ribosome of E. coli containing two contiguous domains of the 16 S RNA

1 reference

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7 January 2021

Binding of ribosomal protein S1 of Escherichia coli to the 3' end of 16S rRNA

1 reference

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7 January 2021

The 3′ terminus of 16S rRNA: secondary structure and interaction with ribosomal protein S1

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7 January 2021

Electron microscopic determination of the binding sites of ribosomal proteins S4 and S8 on 16S RNA.

1 reference

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7 January 2021

Identification of Escherichia coli and Bacillus stearothermophilus ribosomal protein binding sites on Escherichia coli 5S RNA

1 reference

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7 January 2021

A ribonuclease-resistant region of 5S RNA and its relation to the RNA binding sites of proteins L18 and L25

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7 January 2021

Structural analyses of E.coli 5S RNA fragments, their associates and complexes with proteins L18 and L25

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7 January 2021

A "bulged" double helix in a RNA-protein contact site.

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7 January 2021

Escherichia coli 5S RNA binding proteins L18 and L25 interact with 5.8S RNA but not with 5S RNA from yeast ribosomes

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7 January 2021

The binding site of Escherichia coli ribosomal protein S4 on 16-S ribosomal RNA from different bacterial species

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7 January 2021

Conservation of ribosomal protein binding sites in prokaryotic 16S RNAs

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7 January 2021

Specific binding of a prokaryotic ribosomal protein to a eukaryotic ribosomal RNA: implications for evolution and autoregulation

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7 January 2021

The secondary structure of the protein L1 binding region of ribosomal 23S RNA. Homologies with putative secondary structures of the L11 mRNA and of a region of mitochondrial 16S rRNA.

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7 January 2021

Structure, assembly, and function of ribosomes

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7 January 2021

Photoinduced covalent crosslinkage, in situ, of Escherichia coli 50 S ribosomal proteins to rRNA

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7 January 2021

Specific cross-linking of proteins S7 and L4 to ribosomal RNA, by UV irradiation of Escherichia coli ribosomal subunits

1 reference

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7 January 2021

Polynucleotide-Protein Interactions in the Translation System. Detection of Contacts between Some Ribosomal Split Proteins and 16-S RNA in 30-S Subunits of Escherichia coli Ribosomes

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7 January 2021

Covalent cross-linking of ribosomal RNA and proteins by methylene blue-sensitized photooxidation

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7 January 2021

RNA-protein crosslinking by reaction with a soluble carbodiimide

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7 January 2021

30S Ribosomal proteins associated with the 3′‐terminus of 16S RNA

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7 January 2021

30S ribosomal proteins cross-linked to 16S RNA by periodate oxidation followed by borohydride reduction

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7 January 2021

The Use of Formaldehyde in RNA-Protein Cross-linking Studies with Ribosomal Subunits from Escherichia coli

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7 January 2021

Chemical cross-linking of protein to RNA within intact ribosomal subunits from Escherichia coli

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7 January 2021

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7 January 2021

RNA-Protein Neighbourhoods of the Ribosome Obtained by Crosslinking

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7 January 2021

RNA-protein complexes identified by crosslinking of polysomes

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7 January 2021

The use of sym-triazine trichloride in RNA-protein cross-linking studies with Escherichia coli ribosomal subunits

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7 January 2021

Reagents suitable for the crosslinking of nucleic acids to proteins

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7 January 2021

The use of azidoarylimidoesters in RNA-protein cross-linking studies with Escherichia coli ribosomes

1 reference

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7 January 2021

Synthesis of a new reagent, ethyl 4-azidobenzoylaminoacetimidate, and its use for RNA-protein cross-linking within Escherichia coli ribosomal 30-S subunits

1 reference

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7 January 2021

Synthesis and properties of N-acetyl-N'-(p-glyoxylylbenzoyl)cystamine, a new reagent for RNA-RNA and RNA-protein cross-linking

1 reference

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7 January 2021

Identification of neighboring protein pairs in the Escherichia coli 30 S ribosomal subunit by crosslinking with methyl-4-mercaptobutyrimidate

1 reference

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7 January 2021

The use of 2-iminothiolane as an RNA-protein cross-linking agent in Escherichia coli ribosomes, and the localisation on 23S RNA of sites cross-linked to proteins L4, L6, L21, L23, L27 and L29

1 reference

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7 January 2021

Transformation of non-covalent interactions in nucleoproteins into covalent bonds induced by nucleophilic reagents. I. The preparation and properties of the products of bisulfite ion-catalyzed reaction of amino acids and peptides with cytosine deriv

1 reference

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7 January 2021

A new nucleic acid-protein cross-linking reagent

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7 January 2021

Identification of the oligonucleotide and oligopeptide involved in an RNA-protein crosslink induced by ultraviolet irradiation of Escherichia coli 30 S ribosomal subunits

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7 January 2021

Max-Planck-Institut für Molekulare Genetik, Abteilung Wittmann, Berlin-Dahlem, GFR.

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7 January 2021

The primary structure of ribosomal protein S7 fromE. Colistrains K and B

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7 January 2021

Effect of ultraviolet irradiation on 30-S ribosomal subunits. Identification of the RNA region crosslinked to protein S7.

1 reference

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7 January 2021

Characterization of the regions from E. coli 16 S RNA covalently linked to ribosomal proteins S4 and S20 after ultraviolet irradiation

1 reference

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7 January 2021

Studies of the binding sites of Escherichia coli ribosomal protein S7 with 16S RNA by ultraviolet irradiation

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7 January 2021

Interstrand cross-linking of DNA by difunctional alkylating agents

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7 January 2021

Evidence for RNA-RNA cross-link formation in Escherichia coli ribosomes

1 reference

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7 January 2021

Studies on the photo-C4-cyclo-addition reactions between skin-photosensitizing furocoumarins and nucleic acids

1 reference

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7 January 2021

Base-pairing between distant regions of the Escherichia coli 16 S ribosomal RNA in solution

1 reference

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7 January 2021

Crosslinking studies on the organization of the 16 S ribosomal RNA within the 30 S Escherichia coli ribosomal subunit

1 reference

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7 January 2021

Analysis of RNA secondary structure by photochemical reversal of psoralen crosslinks

1 reference

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7 January 2021

Gel electrophoretic technique for separating crosslinked RNAs. Application to improved electron microscopic analysis of psoralen crosslinked 16 S ribosomal RNA

1 reference

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7 January 2021

Marking the polarity of RNA molecules for electron microscopy by covalent attachment of psoralen-DNA restriction fragments

1 reference

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7 January 2021

Covalent crosslinking of tRNA1Val to 16S RNA at the ribosomal P site: identification of crosslinked residues

1 reference

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7 January 2021

Functional conservation near the 3' end of eukaryotic small subunit RNA: photochemical crosslinking of P site-bound acetylvalyl-tRNA to 18S RNA of yeast ribosomes

1 reference

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7 January 2021

The 30 S ribosomal subparticle retains its main morphological features after removal of half the proteins

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7 January 2021

Topography of RNA in the ribosome: location of the 3'-end of 5 S RNA on the central protuberance of the 50 S subunit

1 reference

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7 January 2021

Localization of 3' ends of 5S and 23S rRNAs in reconstituted subunits of Escherichia coli ribosomes

1 reference

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7 January 2021

Localization of the 3′ end of Escherichia coli 16 S RNA by electron microscopy of antibody-labelled subunits

1 reference

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7 January 2021

Localization of the 3' end of 16S rRNA in Escherichia coli 30S ribosomal subunits by immuno electron microscopy

1 reference

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7 January 2021

Topography of RNA in the ribosome: localization of the 3'-end of the 23 S rna on the surface of the 50 S ribosomal subunit by immune electron microscopy

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7 January 2021

Topography of rna in the ribosome localization of the 16 s rna 5' end by immune electron microscopy

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7 January 2021

Ribosome structure: localization of N6,N6-dimethyladenosine by electron microscopy of a ribosome-antibody complex

1 reference

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7 January 2021

Studies on ribosome structure and interactions near the m26A m26A sequence

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7 January 2021

Localization of the decoding region on the 30S Escherichia coli ribosomal subunit by affinity immunoelectron microscopy

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7 January 2021

The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites

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7 January 2021

How ribosomes select initiator regions in mRNA: base pair formation between the 3' terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli

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7 January 2021

Mutants of Escherichia coli lacking ribosomal protein L1

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7 January 2021

RNA sequences associated with proteins L1, L9, and L5, L18, L25, in ribonucleoprotein fragments isolated from the 50-S subunit of Escherichia coli ribosomes

1 reference

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7 January 2021

A fragment of 23S RNA containing a nucleotide sequence complementary to a region of 5S RNA

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7 January 2021

Protection of specific sites in 23 S and 5 S RNA from chemical modification by association of 30 S and 50 S ribosomes

1 reference

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7 January 2021

Mechanism of ribosomal subunit association: discrimination of specific sites in 16 S RNA essential for association activity

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7 January 2021

Segments of the 16 S RNA located on the surface of the 30 S subunits of Escherichia coli ribosomes

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7 January 2021

An enzymatic approach for localization of oligodeoxyribonucleotide binding sites on RNA. Application to studying rRNA topography

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7 January 2021

Basepairing potential of the 3′ terminus of 16S RNA: dependence on the functional state of the 30S subunit and the presence of protein S21

1 reference

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7 January 2021

Site-directed mutagenesis of ribosomal RNA. Construction and characterization of deletion mutants

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7 January 2021

Identification of a 16-S RNA Fragment Crosslinked to Protein S1 within Escherichia coli Ribosomal 30-S Subunits by the Use of a Crosslinking Reagent: Ethyl 4-Azidobenzoylaminoacetimidate

179

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10.1016/S0079-6603(08)60081-1

DOI

https://api.crossref.org/works/10.1016/S0079-6603(08)60081-1

10.1016/S0079-6603(08)60081-1

4 October 2023

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