Positional information resolves structural variations and uncovers an evolutionarily divergent genetic locus in accessions of Arabidopsis thaliana. (Q39745174)

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English	Positional information resolves structural variations and uncovers an evolutionarily divergent genetic locus in accessions of Arabidopsis thaliana.	scientific article

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2 February 2020

Positional information resolves structural variations and uncovers an evolutionarily divergent genetic locus in accessions of Arabidopsis thaliana (English)

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2 February 2020

Arabidopsis thaliana

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Matthew Denton-Giles

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2 February 2020

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2 February 2020

Jozefus Schippers

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2 February 2020

Bernd Müller-Röber

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Bernd Mueller-Roeber

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2 February 2020

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Paul P Dijkwel

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2 February 2020

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27 May 2011

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2 February 2020

Genome Biology and Evolution

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2 February 2020

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2 February 2020

627-640

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2 February 2020

The case for resequencing studies of Arabidopsis thaliana accessions: mining the dark matter of natural genetic variation

1 reference

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14 September 2017

Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata

1 reference

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14 September 2017

Natural variation at Strubbelig Receptor Kinase 3 drives immune-triggered incompatibilities between Arabidopsis thaliana accessions.

1 reference

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Selection upon genome architecture: conservation of functional neighborhoods with changing genes

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14 September 2017

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Population genetic inference from genomic sequence variation

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Substantial deletion overlap among divergent Arabidopsis genomes revealed by intersection of short reads and tiling arrays

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Genomics. Genome project standards in a new era of sequencing

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14 September 2017

Copy number variation in human health, disease, and evolution

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14 September 2017

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

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14 September 2017

Every genome sequence needs a good map

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14 September 2017

Targeted resequencing and analysis of the Diamond-Blackfan anemia disease locus RPS19.

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What has natural variation taught us about plant development, physiology, and adaptation?

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Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding

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14 September 2017

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Haplotype structure strongly affects recombination in a maize genetic interval polymorphic for Helitron and retrotransposon insertions

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14 September 2017

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14 September 2017

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Whole-genome tiling array analysis of Mycobacterium leprae RNA reveals high expression of pseudogenes and noncoding regions

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14 September 2017

Incremental steps toward incompatibility revealed by Arabidopsis epistatic interactions modulating salicylic acid pathway activation.

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14 September 2017

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14 September 2017

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14 September 2017

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

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14 September 2017

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14 September 2017

Detecting polymorphic regions in Arabidopsis thaliana with resequencing microarrays

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14 September 2017

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14 September 2017

Paired-end mapping reveals extensive structural variation in the human genome

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14 September 2017

Recurrent duplication-driven transposition of DNA during hominoid evolution

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14 September 2017

Structural variation of the human genome

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14 September 2017

Structural variation in the human genome

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14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

Fine-scale structural variation of the human genome

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14 September 2017

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14 September 2017

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14 September 2017

Large-scale copy number polymorphism in the human genome

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14 September 2017

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14 September 2017

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14 September 2017

An expressed pseudogene regulates the messenger-RNA stability of its homologous coding gene

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14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

Segmental duplications and the evolution of the primate genome

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14 September 2017

Construction and analysis of a human-chimpanzee comparative clone map.

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14 September 2017

Positive selection of a gene family during the emergence of humans and African apes

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14 September 2017

The evolutionary fate and consequences of duplicate genes

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14 September 2017

Primer3 on the WWW for general users and for biologist programmers

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14 September 2017

Hybrid zones and the genetic architecture of a barrier to gene flow between two sunflower species

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14 September 2017

Segmental duplications: organization and impact within the current human genome project assembly

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

14 September 2017

Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

25 September 2017

Sequencing of natural strains of Arabidopsis thaliana with short reads

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

25 September 2017

Genome size variation among accessions of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

17 June 2018

Population resequencing reveals local adaptation of Arabidopsis lyrata to serpentine soils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

Comparative sequence analyses of the major quantitative trait locus phosphorus uptake 1 (Pup1) reveal a complex genetic structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

Genome sequence comparison of Col and Ler lines reveals the dynamic nature of Arabidopsis chromosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

A genetic defect caused by a triplet repeat expansion in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

The xenobiotic beta-aminobutyric acid enhances Arabidopsis thermotolerance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

Green genes-comparative genomics of the green branch of life.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

Assembling millions of short DNA sequences using SSAKE.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

Gene-breaking: a new paradigm for human retrotransposon-mediated gene evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

Identification and isolation of the FEEBLY gene from tomato by transposon tagging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3157834

20 August 2018

Integrated cytogenetic map of chromosome arm 4S of A. thaliana: structural organization of heterochromatic knob and centromere region

1 reference

https://pubmed.ncbi.nlm.nih.gov/21622917

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/GBE/EVR038

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21622917%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21622917%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21622917%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

ResearchGate publication ID

0 references

Sitelinks

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