Long non-coding RNAs and complex diseases: from experimental results to computational models (Q38848384)

7 September 2017

2 references

17 November 2020

Long non-coding RNAs and complex diseases: from experimental results to computational models (English)

1 reference

7 September 2017

1 reference

17 November 2020

Xing Chen

1

1 reference

7 September 2017

Chenggang Clarence Yan

series ordinal

2

1 reference

7 September 2017

Xu Zhang

series ordinal

3

1 reference

7 September 2017

Zhu-Hong You

series ordinal

4

1 reference

7 September 2017

publication date

26 June 2016

1 reference

Briefings in Bioinformatics

7 September 2017

1 July 2017

1 reference

17 November 2020

2 references

7 September 2017

17 November 2020

18

1 reference

7 September 2017

issue

4

1 reference

7 September 2017

page(s)

558-576

1 reference

Creative Commons Attribution-NonCommercial 4.0 International

7 September 2017

copyright license

1 reference

Establishing the triplet nature of the genetic code

17 November 2020

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The c-Myc oncogene directly induces the H19 noncoding RNA by allele-specific binding to potentiate tumorigenesis

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Overexpression of an ectopic H19 gene enhances the tumorigenic properties of breast cancer cells

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Characterization of a germ-line deletion, including the entire INK4/ARF locus, in a melanoma-neural system tumor family: identification of ANRIL, an antisense noncoding RNA whose expression coclusters with ARF.

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GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer

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Characterizing the Genetic Basis for Nicotine Induced Cancer Development: A Transcriptome Sequencing Study

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21 January 2018

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Estrogen suppresses hepatocellular carcinoma cells through ERβ-mediated upregulation of the NLRP3 inflammasome.

21 January 2018

1 reference

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Increased risk of hepatocellular carcinoma in chronic hepatitis B patients with new onset diabetes: a nationwide cohort study.

21 January 2018

1 reference

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Epigenetic activation of the MiR-200 family contributes to H19-mediated metastasis suppression in hepatocellular carcinoma

21 January 2018

1 reference

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Characteristics of long non-coding RNA and its relation to hepatocellular carcinoma

21 January 2018

1 reference

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Characterization of HULC, a novel gene with striking up-regulation in hepatocellular carcinoma, as noncoding RNA.

21 January 2018

1 reference

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Repression of the long noncoding RNA-LET by histone deacetylase 3 contributes to hypoxia-mediated metastasis.

21 January 2018

1 reference

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Decoding the non-coding RNAs in Alzheimer's disease

21 January 2018

1 reference

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A network dysfunction perspective on neurodegenerative diseases

21 January 2018

1 reference

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Non-coding RNAs in Alzheimer's disease

21 January 2018

1 reference

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Long noncoding RNAs in development and disease of the central nervous system

21 January 2018

1 reference

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Dendritic BC200 RNA in aging and in Alzheimer's disease

21 January 2018

1 reference

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Transcriptome analysis reveals distinct patterns of long noncoding RNAs in heart and plasma of mice with heart failure

21 January 2018

1 reference

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Autoantibodies in heart failure and cardiac dysfunction

21 January 2018

1 reference

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21 January 2018

1 reference

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Long noncoding RNA: a new player of heart failure?

21 January 2018

1 reference

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Circulating long noncoding RNA, LIPCAR, predicts survival in patients with heart failure

21 January 2018

1 reference

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Hypermethylation of the promoter region is associated with the loss of MEG3 gene expression in human pituitary tumors

21 January 2018

1 reference

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Selective loss of MEG3 expression and intergenic differentially methylated region hypermethylation in the MEG3/DLK1 locus in human clinically nonfunctioning pituitary adenomas

21 January 2018

1 reference

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Silencing of the imprinted DLK1-MEG3 locus in human clinically nonfunctioning pituitary adenomas

21 January 2018

1 reference

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The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes

21 January 2018

1 reference

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Long noncoding RNA in prostate, bladder, and kidney cancer.

21 January 2018

1 reference

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LncRNA: a new player in 1α, 25(OH)(2) vitamin D(3) /VDR protection against skin cancer formation

21 January 2018

1 reference

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Long non-coding RNA H19 increases bladder cancer metastasis by associating with EZH2 and inhibiting E-cadherin expression

21 January 2018

1 reference

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Long non-coding RNAs: a new frontier in the study of human diseases

21 January 2018

1 reference

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Stratification of Wilms tumor by genetic and epigenetic analysis

21 January 2018

1 reference

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Epigenetic alterations of H19 and LIT1 distinguish patients with Beckwith-Wiedemann syndrome with cancer and birth defects

21 January 2018

1 reference

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Large noncoding RNA HOTAIR enhances aggressive biological behavior and is associated with short disease-free survival in human non-small cell lung cancer

21 January 2018

1 reference

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Large intervening non-coding RNA HOTAIR is associated with hepatocellular carcinoma progression

21 January 2018

1 reference

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Role of the lncRNA-p53 regulatory network in cancer

21 January 2018

1 reference

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Induction of long intergenic non-coding RNA HOTAIR in lung cancer cells by type I collagen

21 January 2018

1 reference

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Upregulation of miR-196a and HOTAIR Drive Malignant Character in Gastrointestinal Stromal Tumors

21 January 2018

1 reference

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Lnc RNA HOTAIR functions as a competing endogenous RNA to regulate HER2 expression by sponging miR-331-3p in gastric cancer

21 January 2018

1 reference

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The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells

21 January 2018

1 reference

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The long non-coding RNAs, a new cancer diagnostic and therapeutic gold mine

21 January 2018

1 reference

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Upregulated MALAT-1 contributes to bladder cancer cell migration by inducing epithelial-to-mesenchymal transition

21 January 2018

1 reference

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Emerging roles of non-coding RNAs in pancreatic β-cell function and dysfunction

21 January 2018

1 reference

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Pvt1-encoded microRNAs in oncogenesis

21 January 2018

1 reference

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LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs

21 January 2018

1 reference

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Lnc2Cancer: a manually curated database of experimentally supported lncRNAs associated with various human cancers

21 January 2018

1 reference

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LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression

21 January 2018

1 reference

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DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs

21 January 2018

1 reference

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LncRBase: an enriched resource for lncRNA information

21 January 2018

1 reference

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lncRNome: a comprehensive knowledgebase of human long noncoding RNAs

21 January 2018

1 reference

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GREENC: a Wiki-based database of plant lncRNAs

21 January 2018

1 reference

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SNP@lincTFBS: an integrated database of polymorphisms in human LincRNA transcription factor binding sites

21 January 2018

1 reference

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lncRNASNP: a database of SNPs in lncRNAs and their potential functions in human and mouse

21 January 2018

1 reference

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A bioinformatics method for predicting long noncoding RNAs associated with vascular disease.

21 January 2018

1 reference

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Mammalian ncRNA-disease repository: a global view of ncRNA-mediated disease network

21 January 2018

1 reference

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LncTar: a tool for predicting the RNA targets of long noncoding RNAs

21 January 2018

1 reference

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Revealing protein-lncRNA interaction

21 January 2018

1 reference

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Computational recognition for long non-coding RNA (lncRNA): Software and databases.

21 January 2018

1 reference

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Prediction of disease-related interactions between microRNAs and environmental factors based on a semi-supervised classifier

21 January 2018

1 reference

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RWRMDA: predicting novel human microRNA-disease associations

21 January 2018

1 reference

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RBMMMDA: predicting multiple types of disease-microRNA associations

21 January 2018

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Semi-supervised learning for potential human microRNA-disease associations inference

21 January 2018

1 reference

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A novel candidate disease genes prioritization method based on module partition and rank fusion.

21 January 2018

1 reference

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miREFRWR: a novel disease-related microRNA-environmental factor interactions prediction method

21 January 2018

1 reference

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WBSMDA: Within and Between Score for MiRNA-Disease Association prediction

21 January 2018

1 reference

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Construction of a lncRNA-PCG bipartite network and identification of cancer-related lncRNAs: a case study in prostate cancer

21 January 2018

1 reference

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Prioritizing candidate disease-related long non-coding RNAs by walking on the heterogeneous lncRNA and disease network

21 January 2018

1 reference

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Heterogeneous network model to infer human disease-long intergenic non-coding RNA associations

21 January 2018

1 reference

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KATZLDA: KATZ measure for the lncRNA-disease association prediction

21 January 2018

1 reference

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A network based method for analysis of lncRNA-disease associations and prediction of lncRNAs implicated in diseases

21 January 2018

1 reference

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A computational framework to infer human disease-associated long noncoding RNAs

21 January 2018

1 reference

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Predicting lncRNA-disease associations and constructing lncRNA functional similarity network based on the information of miRNA

21 January 2018

1 reference

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Amplification of PVT-1 is involved in poor prognosis via apoptosis inhibition in colorectal cancers

21 January 2018

1 reference

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MALAT-1 enhances cell motility of lung adenocarcinoma cells by influencing the expression of motility-related genes.

21 January 2018

1 reference

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P53-regulated long non-coding RNA TUG1 affects cell proliferation in human non-small cell lung cancer, partly through epigenetically regulating HOXB7 expression

21 January 2018

1 reference

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Tumor hypoxia induces nuclear paraspeckle formation through HIF-2α dependent transcriptional activation of NEAT1 leading to cancer cell survival

21 January 2018

1 reference

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MALAT1 promotes cell proliferation in gastric cancer by recruiting SF2/ASF.

21 January 2018

1 reference

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Computational approaches towards understanding human long non-coding RNA biology

21 January 2018

1 reference

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Long noncoding RNAs and human disease

21 January 2018

1 reference

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Flaws in evaluation schemes for pair-input computational predictions.

21 January 2018

1 reference

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HOTAIR long non-coding RNA is a negative prognostic factor not only in primary tumors, but also in the blood of colorectal cancer patients

21 January 2018

1 reference

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Genetic variants at the 9p21 locus contribute to atherosclerosis through modulation of ANRIL and CDKN2A/B

21 January 2018

1 reference

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Loss of imprinting of long QT intronic transcript 1 in colorectal cancer

21 January 2018

1 reference

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12 December 2020

A four-long non-coding RNA signature in predicting breast cancer survival

1 reference

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12 December 2020

The human H19 gene is frequently overexpressed in myometrium and stroma during pathological endometrial proliferative events

1 reference

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12 December 2020

A long noncoding RNA activated by TGF-β promotes the invasion-metastasis cascade in hepatocellular carcinoma

1 reference

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12 December 2020

Upregulated lncRNA-UCA1 contributes to progression of lung cancer and is closely related to clinical diagnosis as a predictive biomarker in plasma

1 reference

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12 December 2020

ILNCSIM: improved lncRNA functional similarity calculation model

1 reference

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12 December 2020

DD3: a new prostate-specific gene, highly overexpressed in prostate cancer

1 reference

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12 December 2020

H19 RNA downregulation stimulated melanogenesis in melasma

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12 December 2020

An update on LNCipedia: a database for annotated human lncRNA sequences

1 reference

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12 December 2020

Screening for and surveillance of high-risk patients with HBV-related chronic liver disease: promoting the early detection of hepatocellular carcinoma in China

1 reference

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12 December 2020

Inferring novel lncRNA-disease associations based on a random walk model of a lncRNA functional similarity network

1 reference

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12 December 2020

MEG3 imprinted gene contribution in tumorigenesis

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12 December 2020

Developmental control of allelic methylation in the imprinted mouse Igf2 and H19 genes

1 reference

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12 December 2020

Long non-coding RNAs: emerging players in gastric cancer

1 reference

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12 December 2020

[Evaluation of novel gene UCA1 as a tumor biomarker for the detection of bladder cancer]

1 reference

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12 December 2020

Murine T lymphomas with retroviral inserts in the chromosomal 15 locus for plasmacytoma variant translocations.

1 reference

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12 December 2020

Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/27345524

12 December 2020

Genetic variation in the non-coding genome: Involvement of micro-RNAs and long non-coding RNAs in disease

1 reference

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12 December 2020

Polycomb group proteins Ezh2 and Rnf2 direct genomic contraction and imprinted repression in early mouse embryos

1 reference

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12 December 2020

The incidence and epidemiology of hepatocellular carcinoma: a global and regional perspective

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12 December 2020

NONCODE: an integrated knowledge database of non-coding RNAs

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12 December 2020

Identifiers

DOI

10.1093/BIB/BBW060

1 reference

7 September 2017

DBLP publication ID

journals/bib/ChenYZY17

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

5862301

0 references

1 reference