Probing the ArcA-P modulon of Escherichia coli by whole genome transcriptional analysis and sequence recognition profiling. (Q38346192)

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17 November 2019

title

Probing the ArcA-P modulon of Escherichia coli by whole genome transcriptional analysis and sequence recognition profiling (English)

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17 November 2019

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whole genome sequencing

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2

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17 November 2019

author name string

Xueqiao Liu

series ordinal

1

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17 November 2019

language of work or name

English

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publication date

7 January 2004

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Journal of Biological Chemistry

17 November 2019

published in

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17 November 2019

volume

279

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17 November 2019

issue

13

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17 November 2019

page(s)

12588-12597

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The requirement of ArcA and Fnr for peak expression of the cyd operon in Escherichia coli under microaerobic conditions.

17 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Adaptation of Escherichia coli to redox environments by gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Effects of nitrate respiration on expression of the Arc-controlled operons encoding succinate dehydrogenase and flavin-linked L-lactate dehydrogenase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

arcA (dye), a global regulatory gene in Escherichia coli mediating repression of enzymes in aerobic pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Quinones as the redox signal for the arc two-component system of bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Aerobic regulation of isocitrate dehydrogenase gene (icd) expression in Escherichia coli by the arcA and fnr gene products

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Regulation of succinate dehydrogenase (sdhCDAB) operon expression in Escherichia coli in response to carbon supply and anaerobiosis: role of ArcA and Fnr.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Two global regulators repress the anaerobic expression of MnSOD in Escherichia coli::Fur (ferric uptake regulation) and Arc (aerobic respiration control).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Purification of ArcA and analysis of its specific interaction with the pfl promoter-regulatory region

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Transcriptional control mediated by the ArcA two-component response regulator protein of Escherichia coli: characterization of DNA binding at target promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

The ArcA/ArcB two-component regulatory system of Escherichia coli is essential for Xer site-specific recombination at psi.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

The arc two-component signal transduction system inhibits in vitro Escherichia coli chromosomal initiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Methods for generating precise deletions and insertions in the genome of wild-type Escherichia coli: application to open reading frame characterization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Differential stringent control of the tandem E. coli ribosomal RNA promoters from the rrnA operon expressed in vivo in multicopy plasmids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Role of multiple ArcA recognition sites in anaerobic regulation of succinate dehydrogenase (sdhCDAB) gene expression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Multimerization of phosphorylated and non-phosphorylated ArcA is necessary for the response regulator function of the Arc two-component signal transduction system

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

"Stemness": transcriptional profiling of embryonic and adult stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Transcriptome analysis of all two-component regulatory system mutants of Escherichia coli K-12.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Laboratory workhorse decoded.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

The Global Regulator ArcA Modulates Expression of Virulence Factors in Vibrio cholerae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Two-component systems in Haemophilus influenzae: a regulatory role for ArcA in serum resistance

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Global gene expression profiling in Escherichia coli K12. The effects of oxygen availability and FNR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Adaptation to famine: a family of stationary-phase genes revealed by microarray analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Sequence logos: a new way to display consensus sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

Signal transduction and bacterial conjugation: characterization of the role of ArcA in regulating conjugative transfer of the resistance plasmid R1

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313454200

21 January 2018

Identifiers

DOI

10.1074/JBC.M313454200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14711822%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

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