Controlling gene expression in response to stress. (Q37952115)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22048664%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

title

Controlling gene expression in response to stress (English)

1 reference

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15 January 2020

1

1 reference

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15 January 2020

Francesc Posas

series ordinal

3

1 reference

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15 January 2020

author name string

Gustav Ammerer

series ordinal

2

1 reference

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15 January 2020

publication date

3 November 2011

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15 January 2020

published in

Nature Reviews Genetics

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15 January 2020

volume

12

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15 January 2020

issue

12

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15 January 2020

page(s)

833-845

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Mechanisms of activation and regulation of the heat shock-sensitive signaling pathways

15 January 2020

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Mucins, osmosensors in eukaryotic cells?

31 March 2020

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Activation of the chaperone Hsp26 is controlled by the rearrangement of its thermosensor domain

31 March 2020

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31 March 2020

Microbial thermosensors.

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An internal thermal sensor controlling temperature preference in Drosophila

31 March 2020

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Ambient thermometers in plants: from physiological outputs towards mechanisms of thermal sensing

31 March 2020

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Mammalian mitogen-activated protein kinase signal transduction pathways activated by stress and inflammation

31 March 2020

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Signal integration by JNK and p38 MAPK pathways in cancer development

31 March 2020

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31 March 2020

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Role of mitogen-activated protein kinase kinase kinases in signal integration

31 March 2020

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Robustness and fragility in the yeast high osmolarity glycerol (HOG) signal-transduction pathway

31 March 2020

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Stimulus-specific distinctions in spatial and temporal dynamics of stress-activated protein kinase kinase kinases revealed by a fluorescence resonance energy transfer biosensor

31 March 2020

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MAP kinase-mediated stress relief that precedes and regulates the timing of transcriptional induction

31 March 2020

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Stress-activated genomic expression changes serve a preparative role for impending stress in yeast

31 March 2020

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Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation

31 March 2020

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Stress resistance and signal fidelity independent of nuclear MAPK function

31 March 2020

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Structure and function of a transcriptional network activated by the MAPK Hog1.

31 March 2020

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Dynamic and complex transcription factor binding during an inducible response in yeast

31 March 2020

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Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast

31 March 2020

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Transcription Factor and Polymerase Recruitment, Modification, and Movement on dhsp70 In Vivo in the Minutes following Heat Shock

31 March 2020

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Combination of two activating mutations in one HOG1 gene forms hyperactive enzymes that induce growth arrest

31 March 2020

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Sir2 histone deacetylase prevents programmed cell death caused by sustained activation of the Hog1 stress-activated protein kinase

31 March 2020

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AKT and oxidative stress team up to kill cancer cells.

31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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A systems-level analysis of perfect adaptation in yeast osmoregulation

31 March 2020

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Dynamic signaling in the Hog1 MAPK pathway relies on high basal signal transduction.

31 March 2020

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Comparative genomics of the environmental stress response in ascomycete fungi

31 March 2020

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The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress

31 March 2020

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Diverse and specific gene expression responses to stresses in cultured human cells

31 March 2020

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Whole genome analysis of p38 SAPK-mediated gene expression upon stress.

31 March 2020

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Functional profiling of the Saccharomyces cerevisiae genome

31 March 2020

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Selective requirement for SAGA in Hog1-mediated gene expression depending on the severity of the external osmostress conditions

31 March 2020

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Genome-wide identification of genes involved in tolerance to various environmental stresses in Saccharomyces cerevisiae.

31 March 2020

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The Rpd3L HDAC complex is essential for the heat stress response in yeast.

31 March 2020

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Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes.

31 March 2020

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Hog1 kinase converts the Sko1-Cyc8-Tup1 repressor complex into an activator that recruits SAGA and SWI/SNF in response to osmotic stress

31 March 2020

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Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

31 March 2020

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Functional interplay between chromatin remodeling complexes RSC, SWI/SNF and ISWI in regulation of yeast heat shock genes

31 March 2020

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A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces

31 March 2020

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Cooperation between the INO80 complex and histone chaperones determines adaptation of stress gene transcription in the yeast Saccharomyces cerevisiae

31 March 2020

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Nucleosome organization in the Drosophila genome.

31 March 2020

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Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci

31 March 2020

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Sodium salicylate decreases intracellular ATP, induces both heat shock factor binding and chromosomal puffing, but does not induce hsp 70 gene transcription in Drosophila.

31 March 2020

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Transient activation of the HOG MAPK pathway regulates bimodal gene expression.

31 March 2020

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The MAPK Hog1 recruits Rpd3 histone deacetylase to activate osmoresponsive genes.

31 March 2020

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Chromatin Landscape Dictates HSF Binding to Target DNA Elements

31 March 2020

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HistoneHits: a database for histone mutations and their phenotypes

31 March 2020

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Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock

31 March 2020

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Changes in genomewide occupancy of core transcriptional regulators during heat stress

31 March 2020

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Osmostress-induced transcription by Hot1 depends on a Hog1-mediated recruitment of the RNA Pol II.

31 March 2020

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Regulation of the Sko1 transcriptional repressor by the Hog1 MAP kinase in response to osmotic stress

31 March 2020

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Targeting the MEF2-like transcription factor Smp1 by the stress-activated Hog1 mitogen-activated protein kinase

31 March 2020

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Activated signal transduction kinases frequently occupy target genes

31 March 2020

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Yeast Mpk1 mitogen-activated protein kinase activates transcription through Swi4/Swi6 by a noncatalytic mechanism that requires upstream signal

31 March 2020

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Nutrient regulates Tor1 nuclear localization and association with rDNA promoter.

31 March 2020

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Proteins kinases: chromatin-associated enzymes?

31 March 2020

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Cell signaling. Protein kinases seek close encounters with active genes

31 March 2020

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Stress-induced map kinase Hog1 is part of transcription activation complexes.

31 March 2020

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The Stress-Activated Hog1 Kinase Is a Selective Transcriptional Elongation Factor for Genes Responding to Osmotic Stress

31 March 2020

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Genome-wide location analysis of the stress-activated MAP kinase Hog1 in yeast.

31 March 2020

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Control of Ubp3 ubiquitin protease activity by the Hog1 SAPK modulates transcription upon osmostress.

31 March 2020

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The p38 SAPK is recruited to chromatin via its interaction with transcription factors

31 March 2020

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p38 pathway targets SWI-SNF chromatin-remodeling complex to muscle-specific loci

31 March 2020

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Functional interdependence at the chromatin level between the MKK6/p38 and IGF1/PI3K/AKT pathways during muscle differentiation.

31 March 2020

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Induction of Progesterone Target Genes Requires Activation of Erk and Msk Kinases and Phosphorylation of Histone H3

31 March 2020

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Mitogen-induced recruitment of ERK and MSK to SRE promoter complexes by ternary complex factor Elk-1.

31 March 2020

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RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

31 March 2020

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RNA polymerase is poised for activation across the genome

31 March 2020

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A chromatin landmark and transcription initiation at most promoters in human cells

31 March 2020

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Imaging Drosophila gene activation and polymerase pausing in vivo

31 March 2020

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Transcription regulation through promoter-proximal pausing of RNA polymerase II.

31 March 2020

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Paused RNA polymerase II as a developmental checkpoint

31 March 2020

1 reference

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The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.

31 March 2020

1 reference

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Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Repression of heat shock transcription factor HSF1 activation by HSP90 (HSP90 complex) that forms a stress-sensitive complex with HSF1

31 March 2020

1 reference

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The heat shock factor family and adaptation to proteotoxic stress

31 March 2020

1 reference

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Poised polymerases: on your mark...get set...go!

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

RNA polymerase II promoter-proximal pausing upregulates c-fos gene expression

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Mitogen-activated protein kinase-activated protein kinase 2 regulates tumor necrosis factor mRNA stability and translation mainly by altering tristetraprolin expression, stability, and binding to adenine/uridine-rich element

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Control of mRNA decay by phosphorylation of tristetraprolin.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

p38 Mitogen-activated protein kinase stabilizes SMN mRNA through RNA binding protein HuR.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

p38 Mitogen-activated protein kinase- and HuR-dependent stabilization of p21(Cip1) mRNA mediates the G(1)/S checkpoint

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Heat shock response in yeast involves changes in both transcription rates and mRNA stabilities

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

mRNA stability changes precede changes in steady-state mRNA amounts during hyperosmotic stress

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Specific and global regulation of mRNA stability during osmotic stress in Saccharomyces cerevisiae.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Translational Regulation of Gene Expression during Conditions of Cell Stress

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Heat shock increases the association of binding protein-1 with initiation factor 4E

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

The phosphorylation of eukaryotic initiation factor eIF4E in response to phorbol esters, cell stresses, and cytokines is mediated by distinct MAP kinase pathways

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

The p36 isoform of BAG-1 is translated by internal ribosome entry following heat shock

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Expression of poly(A)-binding protein is upregulated during recovery from heat shock in HeLa cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

The HOG pathway dictates the short-term translational response after hyperosmotic shock

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Transient inhibition of translation initiation by osmotic stress

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Rck2 kinase is a substrate for the osmotic stress-activated mitogen-activated protein kinase Hog1.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Rck2, a member of the calmodulin-protein kinase family, links protein synthesis to high osmolarity MAP kinase signaling in budding yeast

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

GPD1, which encodes glycerol-3-phosphate dehydrogenase, is essential for growth under osmotic stress in Saccharomyces cerevisiae, and its expression is regulated by the high-osmolarity glycerol response pathway

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Dealing with osmostress through MAP kinase activation.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Control of cell cycle in response to osmostress: lessons from yeast.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Signal transduction by MAP kinase cascades in budding yeast

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Regulated nucleo/cytoplasmic exchange of HOG1 MAPK requires the importin beta homologs NMD5 and XPO1.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Kinase activity-dependent nuclear export opposes stress-induced nuclear accumulation and retention of Hog1 mitogen-activated protein kinase in the budding yeast Saccharomyces cerevisiae

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Regulation of the osmoregulatory HOG MAPK cascade in yeast

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

MAP kinases and the adaptive response to hypertonicity: functional preservation from yeast to mammals

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Intranuclear distribution and local dynamics of RNA polymerase II during transcription activation.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

MSK activation and physiological roles

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

p38 MAP-kinases pathway regulation, function and role in human diseases

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

ERK and p38 MAPK-activated protein kinases: a family of protein kinases with diverse biological functions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

p38 MAPK signaling regulates recruitment of Ash2L-containing methyltransferase complexes to specific genes during differentiation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Identification in vivo of different rate-limiting steps associated with transcriptional activators in the presence and absence of a GAGA element

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

DNA sequence requirements for generating paused polymerase at the start of hsp70

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG3055

Phosphorylation of mammalian eIF4E by Mnk1 and Mnk2: tantalizing prospects for a role in translation.

31 March 2020

1 reference

https://pubmed.ncbi.nlm.nih.gov/22048664

12 December 2020

Why do cells require heat shock proteins to survive heat stress?

1 reference

https://pubmed.ncbi.nlm.nih.gov/22048664

12 December 2020

Chaperoning signaling pathways: molecular chaperones as stress-sensing 'heat shock' proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22048664

12 December 2020

Chaperone hsp27 inhibits translation during heat shock by binding eIF4G and facilitating dissociation of cap-initiation complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/22048664

12 December 2020

P-TEFb kinase recruitment and function at heat shock loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/22048664

12 December 2020

The FPS1 gene product functions as a glycerol facilitator in the yeast Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/22048664

12 December 2020

Identifiers

DOI

10.1038/NRG3055

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22048664%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

1 reference