Random-coil behavior and the dimensions of chemically unfolded proteins (Q37493905)

20 August 2017

Random-coil behavior and the dimensions of chemically unfolded proteins (English)

1 reference

20 August 2017

14

Sebastian Doniach

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20 August 2017

Kevin W Plaxco

15

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Tobin R. Sosnick

10

object named as

Tobin R Sosnick

1 reference

20 August 2017

Jonathan E Kohn

1

1 reference

20 August 2017

Ian S Millett

2

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20 August 2017

Jaby Jacob

3

1 reference

20 August 2017

Bojan Zagrovic

4

1 reference

20 August 2017

Thomas M Dillon

5

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20 August 2017

Nikolina Cingel

6

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20 August 2017

Robin S Dothager

7

1 reference

20 August 2017

Soenke Seifert

8

1 reference

20 August 2017

P Thiyagarajan

9

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20 August 2017

M Zahid Hasan

11

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20 August 2017

Vijay S Pande

12

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20 August 2017

Ingo Ruczinski

13

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20 August 2017

language of work or name

English

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publication date

16 August 2004

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20 August 2017

6

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Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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20 August 2017

101

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20 August 2017

34

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20 August 2017

12491-12496

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Reassessing random-coil statistics in unfolded proteins

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Denaturation and reassembly of chaperonin GroEL studied by solution X-ray scattering

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Toward a taxonomy of the denatured state: small angle scattering studies of unfolded proteins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniques

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Biophysical properties of the synucleins and their propensities to fibrillate: inhibition of alpha-synuclein assembly by beta- and gamma-synucleins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Changes in biomolecular conformation seen by small angle X-ray scattering

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

NMR and SAXS characterization of the denatured state of the chemotactic protein CheY: implications for protein folding initiation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Protein folding from a highly disordered denatured state: the folding pathway of chymotrypsin inhibitor 2 at atomic resolution

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Pressure-jump small-angle x-ray scattering detected kinetics of staphylococcal nuclease folding

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Intestinal fatty acid binding protein: the folding mechanism as determined by NMR studies

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

The Flory isolated-pair hypothesis is not valid for polypeptide chains: implications for protein folding

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Identifying the structural boundaries of independent folding domains in the alpha subunit of tryptophan synthase, a beta/alpha barrel protein

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Reversibility and hierarchy of thermal transition of hen egg-white lysozyme studied by small-angle x-ray scattering.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Folding kinetics of the SH3 domain of PI3 kinase by real-time NMR combined with optical spectroscopy

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Substrate specificity of deubiquitinating enzymes: ubiquitin C-terminal hydrolases

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

The folding kinetics and thermodynamics of the Fyn-SH3 domain.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Surface point mutations that significantly alter the structure and stability of a protein's denatured state

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

The denatured state (the other half of the folding equation) and its role in protein stability.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Denatured states of proteins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Truncated staphylococcal nuclease is compact but disordered

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Structure of an SH2 domain of the p85 alpha subunit of phosphatidylinositol-3-OH kinase

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Native-like mean structure in the unfolded ensemble of small proteins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Denatured collapsed states in protein folding: example of apomyoglobin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Hydrodynamic radii of native and denatured proteins measured by pulse field gradient NMR techniques.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Apparent radii of the native, stable intermediates and unfolded conformers of the alpha-subunit of tryptophan synthase from E. coli, a TIM barrel protein

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Protein denaturation: a small-angle X-ray scattering study of the ensemble of unfolded states of cytochrome c.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Excluded volume in the configurational distribution of a strongly-denatured protein

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Mutations can cause large changes in the conformation of a denatured protein.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Dimensions of protein random coils

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

How random is a highly denatured protein?

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Early collapse is not an obligate step in protein folding

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Effects of the difference in the unfolded-state ensemble on the folding of Escherichia coli dihydrofolate reductase

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Observation of residual dipolar couplings in short peptides.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Robustness of the long-range structure in denatured staphylococcal nuclease to changes in amino acid sequence

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Long-range interactions within a nonnative protein

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Molecular alignment of denatured states of staphylococcal nuclease with strained polyacrylamide gels and surfactant liquid crystalline phases

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Equilibrium collapse and the kinetic 'foldability' of proteins

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Persistence of native-like topology in a denatured protein in 8 M urea

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Natively unfolded human prothymosin alpha adopts partially folded collapsed conformation at acidic pH.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=515087

Critical Exponents for the n -Vector Model in Three Dimensions from Field Theory

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0403643101

Denatured states of ribonuclease A have compact dimensions and residual secondary structure

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0403643101

Stabilisation of α-helices by site-directed mutagenesis reveals the importance of secondary structure in the transition state for acylphosphatase folding

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0403643101

The Key to Solving the Protein-Folding Problem Lies in an Accurate Description of the Denatured State Financial support from the Schweizerischer Nationalfonds (Project no. 21-50929.97) is gratefully acknowledged

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Reversible dissociation and unfolding of dimeric creatine kinase isoenzyme MM in guanidine hydrochloride and urea

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Chain collapse can occur concomitantly with the rate-limiting step in protein folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Role of hydrophobic interactions in yeast phosphoglycerate kinase stability

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Proteins in 6-M guanidine hydrochloride. Demonstration of random coil behavior

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Trifluoroethanol-induced conformational transition of hen egg-white lysozyme studied by small-angle X-ray scattering

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Multistep denaturation of Borrelia burgdorferi OspA, a protein containing a single-layer beta-sheet

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Unfolding of dimeric creatine kinase in urea and guanidine hydrochloride as measured using small angle X-ray scattering with synchrotron radiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Protein globularization during folding. A study by synchrotron small-angle X-ray scattering

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Natively unfolded C-terminal domain of caldesmon remains substantially unstructured after the effective binding to calmodulin

1 reference

https://pubmed.ncbi.nlm.nih.gov/15314214

12 December 2020

Identifiers

DOI

10.1073/PNAS.0403643101

1 reference

release_4uszjw6q6nbobpq6ilwdgw37na

20 August 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/4uszjw6q6nbobpq6ilwdgw37na

24 November 2022

mapped directly with Wikidata item

1 reference

20 August 2017

PubMed publication ID

15314214

1 reference