Heteronuclear NMR investigations of dynamic regions of intact Escherichia coli ribosomes (Q37284885)

19 August 2017

Heteronuclear NMR investigations of dynamic regions of intact Escherichia coli ribosomes (English)

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19 August 2017

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Sean R Connell

4

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Paola Fucini

object named as

Paola Fucini

3

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Christina Redfield

object named as

Christina Redfield

7

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Chris Dobson

11

object named as

Christopher M Dobson

1 reference

19 August 2017

9

Carol V Robinson

1 reference

19 August 2017

John Christodoulou

1

1 reference

19 August 2017

Göran Larsson

2

1 reference

19 August 2017

Thelma A Pertinhez

5

1 reference

19 August 2017

Charlotte L Hanson

6

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19 August 2017

Knud H Nierhaus

8

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19 August 2017

Jürgen Schleucher

10

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19 August 2017

language of work or name

English

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publication date

19 July 2004

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Proceedings of the National Academy of Sciences of the United States of America

19 August 2017

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19 August 2017

101

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19 August 2017

30

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19 August 2017

10949-10954

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NMR View: A computer program for the visualization and analysis of NMR data

19 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

The Structural Basis of Large Ribosomal Subunit Function

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Detection of nano-second internal motion and determination of overall tumbling times independent of the time scale of internal motion in proteins from NMR relaxation data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

The ribosome through the looking glass

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

New approaches to the dynamic interpretation and prediction of NMR relaxation data from proteins.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Crystal structure of the ribosome at 5.5 A resolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

The end of the beginning: structural studies of ribosomal proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

The ribosome--a macromolecular machine par excellence

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Flexibility, conformational diversity and two dimerization modes in complexes of ribosomal protein L12

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Visualization of elongation factor G on the Escherichia coli 70S ribosome: the mechanism of translocation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

A single-headed dimer of Escherichia coli ribosomal protein L7/L12 supports protein synthesis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Improved sensitivity of HSQC spectra of exchanging protons at short interscan delays using a new fast HSQC (FHSQC) detection scheme that avoids water saturation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Ribosomal protein L7/L12 is required for optimal translation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Structure of the C-terminal domain of the ribosomal protein L7/L12 from Escherichia coli at 1.7 A

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

The N-Terminal Sequence Protein of L7/L12 Is Responsible for Its Dimerization

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Dynamics of the transition between open and closed conformations in a calmodulin C-terminal domain mutant.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

EF-G-dependent GTP hydrolysis induces translocation accompanied by large conformational changes in the 70S ribosome

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Escherichia coli 70 S ribosome at 15 A resolution by cryo-electron microscopy: localization of fMet-tRNAfMet and fitting of L1 protein

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

The L7/L12 ribosomal domain of the ribosome: structural and functional studies

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

The selective release of one of the two L7/L12 dimers from the Escherichia coli ribosome induced by a monoclonal antibody to the NH2-terminal region.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Cryo-electron microscopic localization of protein L7/L12 within the Escherichia coli 70 S ribosome by difference mapping and Nanogold labeling

26 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0400928101

Dimer/monomer equilibrium and domain separations of Escherichia coli ribosomal protein L7/L12.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0400928101

Visualization of elongation factor Tu on the Escherichia coli ribosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0400928101

Cross-linking of selected residues in the N- and C-terminal domains of Escherichia coli protein L7/L12 to other ribosomal proteins and the effect of elongation factor Tu.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0400928101

Location and domain structure of Escherichia coli ribosomal protein L7/L12: site specific cysteine crosslinking and attachment of fluorescent probes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0400928101

Mitochondrial signaling: the retrograde response

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0400928101

Measuring macromolecular diffusion using heteronuclear multiple-quantum pulsed-field-gradient NMR.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Three-dimensional structures of translating ribosomes by Cryo-EM.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=503724

Functional Compatibility of Elongation Factors Between Mammalian Mitochondrial and Bacterial Ribosomes: Characterization of GTPase Activity and Translation Elongation by Hybrid Ribosomes Bearing Heterologous L7/12 Proteins

3 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0400928101

Nuclear magnetic resonance techniques for studying structure and function of ribosomes

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Mobile domains in ribosomes revealed by proton nuclear magnetic resonance

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Protein dynamics studied by rotating frame 15N spin relaxation times.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Localization of two epitopes of protein L7/L12 to both the body and stalk of the large ribosomal subunit. Immune electron microscopy using monoclonal antibodies

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Propagation of experimental uncertainties using the Lipari-Szabo model-free analysis of protein dynamics

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Conformational independence of N- and C-domains in ribosomal protein L7/L12 and in the complex with protein L10

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Topology of the secondary structure elements of ribosomal protein L7/L12 from E. coli in solution

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

The L7/L12 proteins change their conformation upon interaction of EF-G with ribosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Rotational and conformational dynamics of Escherichia coli ribosomal protein L7/L12

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Anisotropic rotational diffusion of perdeuterated HIV protease from 15N NMR relaxation measurements at two magnetic fields

1 reference

https://pubmed.ncbi.nlm.nih.gov/15263071

12 December 2020

Identifiers

DOI

10.1073/PNAS.0400928101

1 reference

19 August 2017

0 references

1 reference

19 August 2017

PubMed publication ID

15263071

1 reference