Long-read sequence assembly of the gorilla genome (Q37036621)

17 August 2017

Long-read sequence assembly of the gorilla genome (English)

1 reference

17 August 2017

18

David Haussler

0 references

Katherine M Munson

6

0 references

Mark Diekhans

14

object named as

Mark Diekhans

1 reference

17 August 2017

15

Benedict Paten

1 reference

17 August 2017

16

Jay Shendure

1 reference

17 August 2017

20

Evan E Eichler

1 reference

17 August 2017

4

Christopher M Hill

1 reference

17 August 2017

9

Ian Fiddes

1 reference

17 August 2017

12

Carl Baker

1 reference

17 August 2017

7

Maika Malig

1 reference

17 August 2017

3

Mark J P Chaisson

1 reference

17 August 2017

5

Zev N Kronenberg

1 reference

17 August 2017

2

John Huddleston

1 reference

17 August 2017

David Gordon

1

1 reference

17 August 2017

Archana Raja

8

1 reference

17 August 2017

LaDeana W Hillier

10

1 reference

17 August 2017

Christopher Dunn

11

1 reference

17 August 2017

Joel Armstrong

13

1 reference

17 August 2017

Richard K Wilson

17

1 reference

17 August 2017

Chen-Shan Chin

19

1 reference

17 August 2017

language of work or name

English

0 references

publication date

1 April 2016

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17 August 2017

1 reference

17 August 2017

352

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17 August 2017

6281

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17 August 2017

aae0344

1 reference

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Genetic variation and the de novo assembly of human genomes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Assembly and diploid architecture of an individual human genome via single-molecule technologies

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Assembling large genomes with single-molecule sequencing and locality-sensitive hashing

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Mountain gorilla genomes reveal the impact of long-term population decline and inbreeding

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Gibbon genome and the fast karyotype evolution of small apes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Comparative primate genomics: emerging patterns of genome content and dynamics

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

The evolution of lncRNA repertoires and expression patterns in tetrapods

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Genic intolerance to functional variation and the interpretation of personal genomes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Evolution and diversity of copy number variation in the great ape lineage

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Great ape genetic diversity and population history

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

GENCODE: the reference human genome annotation for The ENCODE Project

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Insights into hominid evolution from the gorilla genome sequence

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Performance comparison of whole-genome sequencing platforms

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

The evolution of gene expression levels in mammalian organs

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Comparative genomics search for losses of long-established genes on the human lineage

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Targeted discovery of novel human exons by comparative genomics

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

De novo repeat classification and fragment assembly

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Polymorphism and evolution of HLA class I and II genes and molecules

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Tandem repeats finder: a program to analyze DNA sequences

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

The fragment assembly string graph

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Miropeats: graphical DNA sequence comparisons

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Using native and syntenically mapped cDNA alignments to improve de novo gene finding.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Identification, characterization and comparative genomics of chimpanzee endogenous retroviruses

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

A subterminal satellite located adjacent to telomeres in chimpanzees is absent from the human genome

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920363

Cactus: Algorithms for genome multiple sequence alignment

4 September 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Recent segmental duplications in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Genome assembly forensics: finding the elusive mis-assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Scaffolding pre-assembled contigs using SSPACE

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Consed: a graphical editor for next-generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Fast algorithms for large-scale genome alignment and comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

The origin of man: a chromosomal pictorial legacy

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Primate chromosome evolution: ancestral karyotypes, marker order and neocentromeres.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Full-length transcriptome assembly from RNA-Seq data without a reference genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

STAR: ultrafast universal RNA-seq aligner

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

YPEL1 overexpression in early avian craniofacial mesenchyme causes mandibular dysmorphogenesis by up-regulating apoptosis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

The characterization of gene mutations for human glucose phosphate isomerase deficiency associated with chronic hemolytic anemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

AHNAK2 Participates in the Stress-Induced Nonclassical FGF1 Secretion Pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

The macrosatellite DXZ4 mediates CTCF-dependent long-range intrachromosomal interactions on the human inactive X chromosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Segmental duplications: organization and impact within the current human genome project assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Diversity of human copy number variation and multicopy genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Rates and patterns of great ape retrotransposition

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Microinversions in mammalian evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Chromosomal inversions between human and chimpanzee lineages caused by retrotransposons

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

A mutation in human CMP-sialic acid hydroxylase occurred after the Homo-Pan divergence

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Genome Sequencing of Autism-Affected Families Reveals Disruption of Putative Noncoding Regulatory DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Exploring massive, genome scale datasets with the GenometriCorr package

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Toward better understanding of artifacts in variant calling from high-coverage samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Inference of gorilla demographic and selective history from whole-genome sequence data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

A new Bacillus anthracis found in wild chimpanzees and a gorilla from West and Central Africa

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

How Ebola impacts genetics of Western lowland gorilla populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

The complex evolutionary history of gorillas: insights from genomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Initial sequence of the chimpanzee genome and comparison with the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAE0344

Resolving the complexity of the human genome using single-molecule sequencing

21 January 2018

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1038/NATURE13907

15 July 2023

Identifiers

DOI

10.1126/SCIENCE.AAE0344

1 reference

17 August 2017

1 reference

17 August 2017

PubMed publication ID

27034376

1 reference