Rotavirus YM gene 4: analysis of its deduced amino acid sequence and prediction of the secondary structure of the VP4 protein (Q36701430)

15 August 2017

Rotavirus YM gene 4: analysis of its deduced amino acid sequence and prediction of the secondary structure of the VP4 protein (English)

1 reference

protein structure prediction

15 August 2017

0 references

capsid proteins

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

20 October 2022

viral genes

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

20 October 2022

1 reference

https://api.crossref.org/works/10.1128/JVI.65.7.3738-3745.1991

20 October 2022

1 reference

https://api.crossref.org/works/10.1128/JVI.65.7.3738-3745.1991

20 October 2022

author name string

López S

1

1 reference

15 August 2017

López I

2

1 reference

15 August 2017

Méndez E

4

1 reference

15 August 2017

Soberón X

5

1 reference

15 August 2017

S. López

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

20 October 2022

I. López

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

20 October 2022

P. Romero

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

20 October 2022

E. Méndez

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

20 October 2022

X. Soberón

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

20 October 2022

C. F. Arias

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

20 October 2022

language of work or name

English

0 references

publication date

1 July 1991

1 reference

full work available at URL

15 August 2017

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/1645789/?tool=EBI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

http://jvi.asm.org/cgi/content/abstract/65/7/3738

20 October 2022

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/1645789/pdf/?tool=EBI

20 October 2022

file format

Portable Document Format

online access status

open access

1 reference

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https://europepmc.org/articles/PMC241399

20 October 2022

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

https://europepmc.org/articles/PMC241399?pdf=render

20 October 2022

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1645789

https://journals.asm.org/doi/pdf/10.1128/jvi.65.7.3738-3745.1991

20 October 2022

1 reference

Crossref

DOI

https://api.crossref.org/works/10.1128/JVI.65.7.3738-3745.1991

20 October 2022

1 reference

15 August 2017

65

1 reference

15 August 2017

7

1 reference

15 August 2017

3738-3745

1 reference

Structure of the haemagglutinin membrane glycoprotein of influenza virus at 3 A resolution

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

A simple method for displaying the hydropathic character of a protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

A comprehensive set of sequence analysis programs for the VAX

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Primary structure of the neutralization antigen of simian rotavirus SA11 as deduced from cDNA sequence

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Biochemical mapping of the simian rotavirus SA11 genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Purification of an outer capsid glycoprotein of neonatal calf diarrhea virus and preparation of its antisera

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Rescue and serotypic characterization of noncultivable human rotavirus by gene reassortment.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Proteolytic enhancement of rotavirus infectivity: molecular mechanisms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Structural polypeptides of simian rotavirus SA11 and the effect of trypsin

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

57 Sequencing end-labeled DNA with base-specific chemical cleavages

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Trypsin enhancement of rotavirus infectivity: mechanism of enhancement

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Construction of phylogenetic trees

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Prediction of protein conformation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Optimal alignments in linear space

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Prediction of secondary structure by evolutionary comparison: application to the alpha subunit of tryptophan synthase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

A critical evaluation of methods for prediction of protein secondary structures

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

The complete nucleotide sequence of bovine rotavirus C486 gene 4 cDNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Reassortant rotaviruses containing structural proteins vp3 and vp7 from different parents induce antibodies protective against each parental serotype

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Molecular basis of rotavirus virulence: role of gene segment 4.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

The nucleotide sequence of the VP3 gene of porcine rotavirus OSU

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Molecular and antigenic characterization of porcine rotavirus YM, a possible new rotavirus serotype

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Comparative analysis of the VP3 gene of divergent strains of the rotaviruses simian SA11 and bovine Nebraska calf diarrhea virus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Sequence of the fourth gene of human rotaviruses recovered from asymptomatic or symptomatic infections.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Role of VP3 in human rotavirus internalization after target cell attachment via VP7.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Infectious rotavirus enters cells by direct cell membrane penetration, not by endocytosis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

The rhesus rotavirus gene encoding protein VP3: location of amino acids involved in homologous and heterologous rotavirus neutralization and identification of a putative fusion region

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Rotavirus gene structure and function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Further antigenic characterization of porcine rotavirus YM.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

The rhesus rotavirus outer capsid protein VP4 functions as a hemagglutinin and is antigenically conserved when expressed by a baculovirus recombinant.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Identification of cross-reactive and serotype 2-specific neutralization epitopes on VP3 of human rotavirus.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Passive protection against rotavirus-induced diarrhea by monoclonal antibodies to surface proteins vp3 and vp7.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Immunogenicity of a bovine rotavirus glycoprotein fragment.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Structure of the reovirus cell-attachment protein: a model for the domain organization of sigma 1.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Alpha-helical coiled coils and bundles: how to design an alpha-helical protein

30 September 2017

1 reference

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Three-dimensional structure of rhesus rotavirus by cryoelectron microscopy and image reconstruction

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

VP4 monotype specificities among porcine rotavirus strains of the same VP4 serotype

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

The amino-terminal half of rotavirus SA114fM VP4 protein contains a hemagglutination domain and primes for neutralizing antibodies to the virus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Antigenic relationships among human rotaviruses as determined by outer capsid protein VP4

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Neutralization epitopes on rotavirus SA11 4fM outer capsid proteins

30 September 2017

1 reference

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Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Genes of human (strain Wa) and bovine (strain UK) rotaviruses that code for neutralization and subgroup antigens.

30 September 2017

1 reference

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Marked sequence variation between segment 4 genes of human RV-5 and simian SA 11 rotaviruses.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Localization of VP4 neutralization sites in rotavirus by three-dimensional cryo-electron microscopy

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=241399

Three-dimensional structure of rotavirus

28 June 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/1645789

12 December 2020

Nucleotide sequence of UK bovine rotavirus segment 4: possible host restriction of VP3 genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/1645789

12 December 2020

Conservation in rotaviruses of the protein region containing the two sites associated with trypsin enhancement of infectivity

1 reference

https://pubmed.ncbi.nlm.nih.gov/1645789

12 December 2020

Gene coding assignments for growth restriction, neutralization and subgroup specificities of the W and DS-1 strains of human rotavirus

1 reference

https://pubmed.ncbi.nlm.nih.gov/1645789

12 December 2020

Identification of the rotaviral gene that codes for hemagglutination and protease-enhanced plaque formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/1645789

12 December 2020

Direct serotyping of human rotavirus in stools by an enzyme-linked immunosorbent assay using serotype 1-, 2-, 3-, and 4-specific monoclonal antibodies to VP7

1 reference

https://pubmed.ncbi.nlm.nih.gov/1645789

12 December 2020

Primary structure of the cleavage site associated with trypsin enhancement of rotavirus SA11 infectivity

1 reference

https://pubmed.ncbi.nlm.nih.gov/1645789

12 December 2020

Two types of glycoprotein precursors are produced by the simian rotavirus SA11

1 reference

https://pubmed.ncbi.nlm.nih.gov/1645789

12 December 2020

Identifiers

DOI

0 references

1 reference

15 August 2017

1 reference