Evolution of the yeast protein interaction network (Q36689805)

15 August 2017

Evolution of the yeast protein interaction network (English)

1 reference

15 August 2017

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Wen-Hsiung Li

4

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author name string

Hong Qin

series ordinal

1

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15 August 2017

Henry H S Lu

series ordinal

2

1 reference

15 August 2017

Wei B Wu

series ordinal

3

1 reference

15 August 2017

language of work or name

English

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publication date

13 October 2003

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Proceedings of the National Academy of Sciences of the United States of America

15 August 2017

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15 August 2017

100

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15 August 2017

22

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15 August 2017

12820-12824

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On the origins of cells: a hypothesis for the evolutionary transitions from abiotic geochemistry to chemoautotrophic prokaryotes, and from prokaryotes to nucleated cells

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Regulatory gene networks and the properties of the developmental process

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Modular organization of cellular networks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Network motifs: simple building blocks of complex networks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Analyzing yeast protein-protein interaction data obtained from different sources

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Hierarchical organization of modularity in metabolic networks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Protein interactions: two methods for assessment of the reliability of high throughput observations

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

On the evolution of cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Protein interaction verification and functional annotation by integrated analysis of genome-scale data.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Comparative assessment of large-scale data sets of protein-protein interactions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Specificity and stability in topology of protein networks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Evolutionary rate in the protein interaction network

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Network motifs in the transcriptional regulation network of Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Scale-free networks in biology: new insights into the fundamentals of evolution?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

An overview of endosymbiotic models for the origins of eukaryotes, their ATP-producing organelles (mitochondria and hydrogenosomes), and their heterotrophic lifestyle

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

MIPS: a database for genomes and protein sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Systematic genetic analysis with ordered arrays of yeast deletion mutants

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

A comprehensive two-hybrid analysis to explore the yeast protein interactome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

The COG database: new developments in phylogenetic classification of proteins from complete genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

The large-scale organization of metabolic networks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

From molecular to modular cell biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

30 September 2017

1 reference

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Archaea and the prokaryote-to-eukaryote transition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

A genomic perspective on protein families

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

MIPS: a database for protein sequences, homology data and yeast genome information

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

TreeView: an application to display phylogenetic trees on personal computers

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

The neighbor-joining method: a new method for reconstructing phylogenetic trees

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240702

Birth of scale-free molecular networks and the number of distinct DNA and protein domains per genome.

30 September 2017

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.2235584100

Systems biology. Life's complexity pyramid.

21 January 2018

1 reference

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Were the original eubacteria thermophiles?

21 January 2018

1 reference

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Bridging structural biology and genomics: assessing protein interaction data with known complexes

5 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.2235584100

Potential artefacts in protein-interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.2235584100

Comparable system-level organization of Archaea and Eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.2235584100

The yeast protein interaction network evolves rapidly and contains few redundant duplicate genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.2235584100

How the global structure of protein interaction networks evolves

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.2235584100

21 January 2018

1 reference

18 October 2022

https://opencitations.net/index/coci/api/v1/citations/10.1128/MR.51.2.221-271.1987

Identifiers

DOI

10.1073/PNAS.2235584100

1 reference

15 August 2017

0 references

1 reference

15 August 2017

PubMed publication ID

14557537

1 reference