Maintaining the integrity of human immunodeficiency virus sequence databases. (Q35866856)

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18 October 2019

title

Maintaining the integrity of human immunodeficiency virus sequence databases (English)

1 reference

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18 October 2019

6

J I Mullins

1 reference

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18 October 2019

author name string

G H Learn

1

1 reference

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18 October 2019

B T Korber

2

1 reference

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18 October 2019

B Foley

3

1 reference

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18 October 2019

B H Hahn

4

1 reference

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18 October 2019

S M Wolinsky

5

1 reference

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18 October 2019

language of work or name

English

0 references

publication date

1 August 1996

1 reference

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18 October 2019

number of pages

11

1 reference

inferred from page(s)

published in

Journal of Virology

1 reference

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18 October 2019

volume

70

1 reference

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18 October 2019

issue

8

1 reference

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18 October 2019

page(s)

5720-5730

1 reference

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A computer program designed to screen rapidly for HIV type 1 intersubtype recombinant sequences

18 October 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

The origin of HIV-1 isolate HTLV-IIIB

11 July 2018

1 reference

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Selection for specific sequences in the external envelope protein of human immunodeficiency virus type 1 upon primary infection

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

A novel method employing UNG to avoid carry-over contamination in RNA-PCR.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

Genotypic and phenotypic characterization of HIV-1 patients with primary infection

11 July 2018

1 reference

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Identification of human immunodeficiency virus type 1 envelope genes recombinant between subtypes B and F in two epidemiologically linked individuals from Brazil.

11 July 2018

1 reference

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

11 July 2018

1 reference

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11 July 2018

1 reference

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Evidence for coinfection by multiple strains of human immunodeficiency virus type 1 subtype B in an acute seroconvertor.

11 July 2018

1 reference

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Genetic analysis of human immunodeficiency virus type 1 envelope V3 region isolates from mothers and infants after perinatal transmission

11 July 2018

1 reference

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Analysis of envelope sequence variants suggests multiple mechanisms of mother-to-child transmission of human immunodeficiency virus type 1

11 July 2018

1 reference

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Recombination in AIDS viruses

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

The genetic data environment an expandable GUI for multiple sequence analysis.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

HIV-1 heterogeneity and cytokines. Neuropathogenesis.

11 July 2018

1 reference

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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

11 July 2018

1 reference

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

11 July 2018

1 reference

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Rates and dates of divergence between AIDS virus nucleotide sequences

11 July 2018

1 reference

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Improved tools for biological sequence comparison

11 July 2018

1 reference

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The phylogenetic history of immunodeficiency viruses

11 July 2018

1 reference

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Cloning of HTLV-4 and its relation to simian and human immunodeficiency viruses

11 July 2018

1 reference

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Oncogenes and human cancer: cause or consequence?

11 July 2018

1 reference

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Phylogenies from molecular sequences: inference and reliability

11 July 2018

1 reference

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11 July 2018

1 reference

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Avoiding false positives with PCR

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

Variances of the average numbers of nucleotide substitutions within and between populations.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

Use of uracil DNA glycosylase to control carry-over contamination in polymerase chain reactions

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

DNA recombination during PCR.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

Concurrent evolution of human immunodeficiency virus type 1 in patients infected from the same source: rate of sequence change and low frequency of inactivating mutations

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

A workbench for multiple alignment construction and analysis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

Human immunodeficiency virus type 1 quasispecies in vivo and ex vivo

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

Selective transmission of human immunodeficiency virus type-1 variants from mothers to infants

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

Dual infection of the central nervous system by AIDS viruses with distinct cellular tropisms.

11 July 2018

1 reference

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Highly divergent env sequences of HIV-1 B subtype with two novel V3 loop motifs detected in an AIDS patient in Miami, Florida

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

V3 sequences in primary HIV-1 infection

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

24 September 2018

Recombination in HIV-1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

6 December 2018

Protecting HIV databases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=190542

Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning

6 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8764096

12 December 2020

inferred from PubMed ID database lookup

Multiple aligned sequence editor (MASE)

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8764096

12 December 2020

inferred from PubMed ID database lookup

Lack of HIV transmission in the practice of a dentist with AIDS

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8764096

12 December 2020