Serine-arginine (SR)-rich splicing factors have an exon-independent function in pre-mRNA splicing (Q35057967)

6 August 2017

title

Serine-arginine (SR)-rich splicing factors have an exon-independent function in pre-mRNA splicing (English)

1 reference

6 August 2017

K J Hertel

1

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6 August 2017

T Maniatis

series ordinal

2

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6 August 2017

language of work or name

English

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publication date

1 March 1999

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Proceedings of the National Academy of Sciences of the United States of America

6 August 2017

published in

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6 August 2017

volume

96

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6 August 2017

issue

6

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6 August 2017

page(s)

2651-2655

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Selection and characterization of pre-mRNA splicing enhancers: identification of novel SR protein-specific enhancer sequences

6 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Multiple distinct splicing enhancers in the protein-coding sequences of a constitutively spliced pre-mRNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

T7 RNA polymerase produces 5' end heterogeneity during in vitro transcription from certain templates

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Arginine/serine-rich domains of SR proteins can function as activators of pre-mRNA splicing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

The function of multisite splicing enhancers.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Protein functions in pre-mRNA splicing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Common themes in the function of transcription and splicing enhancers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Regulation of pre-mRNA splicing in metazoa

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

SC35-mediated reconstitution of splicing in U2AF-depleted nuclear extract

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Mutations in the small subunit of the Drosophila U2AF splicing factor cause lethality and developmental defects

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

The structure and function of proteins involved in mammalian pre-mRNA splicing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Assembly of specific SR protein complexes on distinct regulatory elements of the Drosophila doublesex splicing enhancer

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Biochemistry and regulation of pre-mRNA splicing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

SR proteins and splicing control

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Identification of proteins that interact with exon sequences, splice sites, and the branchpoint sequence during each stage of spliceosome assembly

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

The splicing factor U2AF35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Specific commitment of different pre-mRNAs to splicing by single SR proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

A splicing enhancer complex controls alternative splicing of doublesex pre-mRNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Specific interactions between proteins implicated in splice site selection and regulated alternative splicing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Functional analysis of pre-mRNA splicing factor SF2/ASF structural domains

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Protein-protein interactions and 5'-splice-site recognition in mammalian mRNA precursors

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

The role of specific protein-RNA and protein-protein interactions in positive and negative control of pre-mRNA splicing by Transformer 2.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

A nuclear cap binding protein complex involved in pre-mRNA splicing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

SR proteins promote the first specific recognition of Pre-mRNA and are present together with the U1 small nuclear ribonucleoprotein particle in a general splicing enhancer complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Modulation of 5' splice site choice in pre-messenger RNA by two distinct steps

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

U1 snRNP-ASF/SF2 interaction and 5' splice site recognition: characterization of required elements.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

The superfamily of arginine/serine-rich splicing factors

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

The human splicing factor ASF/SF2 can specifically recognize pre-mRNA 5' splice sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Intrinsic U2AF binding is modulated by exon enhancer signals in parallel with changes in splicing activity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Multiple factors including the small nuclear ribonucleoproteins U1 and U2 are necessary for pre-mRNA splicing in vitro.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Scanning from an independently specified branch point defines the 3' splice site of mammalian introns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Improved free-energy parameters for predictions of RNA duplex stability

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

A protein factor, ASF, controls cell-specific alternative splicing of SV40 early pre-mRNA in vitro

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Purification and characterization of pre-mRNA splicing factor SF2 from HeLa cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

Factor required for mammalian spliceosome assembly is localized to discrete regions in the nucleus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

SR proteins: a conserved family of pre-mRNA splicing factors

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

The 35-kDa mammalian splicing factor SC35 mediates specific interactions between U1 and U2 small nuclear ribonucleoprotein particles at the 3' splice site

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

A nuclear cap-binding complex facilitates association of U1 snRNP with the cap-proximal 5' splice site.

8 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.6.2651

SR proteins escort the U4/U6.U5 tri-snRNP to the spliceosome

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15823

SR proteins can compensate for the loss of U1 snRNP functions in vitro

25 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.6.2651

Complementation by SR proteins of pre-mRNA splicing reactions depleted of U1 snRNP

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.6.2651

General splicing factor SF2/ASF promotes alternative splicing by binding to an exonic splicing enhancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.6.2651

A splicing enhancer in the human fibronectin alternate ED1 exon interacts with SR proteins and stimulates U2 snRNP binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.6.2651

Bimolecular exon ligation by the human spliceosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.6.2651

Predicting thermodynamic properties of RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.6.2651

21 January 2018

Identifiers

DOI

10.1073/PNAS.96.6.2651

1 reference

6 August 2017

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1 reference

6 August 2017

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