Associating genes with gene ontology codes using a maximum entropy analysis of biomedical literature (Q35003471)

5 August 2017

title

Associating genes with gene ontology codes using a maximum entropy analysis of biomedical literature (English)

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5 August 2017

0 references

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4

Russ B Altman

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5 August 2017

Soumya Raychaudhuri

1

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5 August 2017

Jeffrey T Chang

series ordinal

2

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5 August 2017

Patrick D Sutphin

series ordinal

3

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5 August 2017

publication date

1 January 2002

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5 August 2017

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5 August 2017

volume

12

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5 August 2017

issue

1

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5 August 2017

page(s)

203-214

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INFORMATION ACCESS: Building A "GenBank" of the Published Literature

5 August 2017

cites work

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8 July 2018

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8 July 2018

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A pragmatic information extraction strategy for gathering data on genetic interactions.

8 July 2018

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Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

8 July 2018

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Gene ontology: tool for the unification of biology

8 July 2018

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8 July 2018

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A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

8 July 2018

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8 July 2018

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Large-scale analysis of the yeast genome by transposon tagging and gene disruption

8 July 2018

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8 July 2018

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Multiple independent defective suppressor-mutator transposon insertions in Arabidopsis: a tool for functional genomics

8 July 2018

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Evaluation of human-readable annotation in biomolecular sequence databases with biological rule libraries

8 July 2018

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Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

8 July 2018

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Patterns of single-nucleotide polymorphisms in candidate genes for blood-pressure homeostasis

8 July 2018

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Characterization of single-nucleotide polymorphisms in coding regions of human genes

8 July 2018

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8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

EUCLID: automatic classification of proteins in functional classes by their database annotations

8 July 2018

1 reference

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Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

SGD: Saccharomyces Genome Database

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Better prediction of protein cellular localization sites with the k nearest neighbors classifier.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Hidden Markov models in computational biology. Applications to protein modeling

8 July 2018

1 reference

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Quantitative monitoring of gene expression patterns with a complementary DNA microarray

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Functions of the gene products of Escherichia coli.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Indexing consistency in MEDLINE

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Basic local alignment search tool

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Selection of Medline contents, the development of its thesaurus, and the indexing process

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Genes, themes and microarrays: using information retrieval for large-scale gene analysis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Constructing biological knowledge bases by extracting information from text sources.

26 October 2018

1 reference

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Accessing genetic information with high-density DNA arrays.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155261

Automatic extraction of protein interactions from scientific abstracts

26 October 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/11779846

12 December 2020

Developing NLP Tools for Genome Informatics: An Information Extraction Perspective

1 reference

https://pubmed.ncbi.nlm.nih.gov/11779846

12 December 2020

Toward Routine Automatic Pathway Discovery from On-line Scientific Text Abstracts

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https://pubmed.ncbi.nlm.nih.gov/11779846

12 December 2020

Automatic annotation for biological sequences by extraction of keywords from MEDLINE abstracts. Development of a prototype system

1 reference

https://pubmed.ncbi.nlm.nih.gov/11779846

12 December 2020

Identifiers

DOI

10.1101/GR.199701

1 reference

5 August 2017

1 reference

5 August 2017

1 reference