Prospects for identifying functional variation across the genome (Q33826666)

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11 January 2020

title

Prospects for identifying functional variation across the genome (English)

1 reference

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11 January 2020

1

1 reference

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11 January 2020

Anthony D Long

series ordinal

2

1 reference

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11 January 2020

author name string

Stuart J Macdonald

series ordinal

1

1 reference

PubMed publication ID

15851675

29 July 2017

Anthony D Long

series ordinal

2

1 reference

PubMed publication ID

15851675

29 July 2017

language of work or name

English

0 references

publication date

25 April 2005

1 reference

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11 January 2020

number of pages

8

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

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11 January 2020

volume

102 Suppl 1

1 reference

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11 January 2020

page(s)

6614-6621

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The genetical structure of populations

11 January 2020

cites work

1 reference

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Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution

4 July 2018

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Noncoding regulatory sequences of Ciona exhibit strong correspondence between evolutionary constraint and functional importance

4 July 2018

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Finishing the euchromatic sequence of the human genome

4 July 2018

1 reference

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Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura

4 July 2018

1 reference

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Mapping complex disease loci in whole-genome association studies

4 July 2018

1 reference

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Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks

4 July 2018

1 reference

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Strong selective sweep associated with a transposon insertion in Drosophila simulans.

4 July 2018

1 reference

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The International HapMap Project

4 July 2018

1 reference

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Sequencing and comparison of yeast species to identify genes and regulatory elements

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Association of the T-cell regulatory gene CTLA4 with susceptibility to autoimmune disease

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Quality and completeness of SNP databases

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Additional SNPs and linkage-disequilibrium analyses are necessary for whole-genome association studies in humans

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease

4 July 2018

1 reference

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Phylogenetic shadowing of primate sequences to find functional regions of the human genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

hairy: A quantitative trait locus for drosophila sensory bristle number.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

The structure of haplotype blocks in the human genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Detecting a local signature of genetic hitchhiking along a recombining chromosome.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Accessing genetic variation: genotyping single nucleotide polymorphisms

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Haplotype variation and linkage disequilibrium in 313 human genes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Regions of lower crossing over harbor more rare variants in African populations of Drosophila melanogaster.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

The genome sequence of Drosophila melanogaster

4 July 2018

1 reference

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Evidence for stabilizing selection in a eukaryotic enhancer element.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

The power of association studies to detect the contribution of candidate genetic loci to variation in complex traits

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

quemao, a Drosophila bristle locus, encodes geranylgeranyl pyrophosphate synthase

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Genetic and molecular analysis of smooth, a quantitative trait locus affecting bristle number in Drosophila melanogaster

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Molecular dissection of a major gene effect on a quantitative trait: the level of alcohol dehydrogenase expression in Drosophila melanogaster.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

The future of genetic studies of complex human diseases

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

The genetic basis of quantitative variation: numbers of sensory bristles of Drosophila melanogaster as a model system

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Molecular analysis of an allozyme cline: alcohol dehydrogenase in Drosophila melanogaster on the east coast of North America.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

A test of neutral molecular evolution based on nucleotide data

4 July 2018

1 reference

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Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Adaptive protein evolution at the Adh locus in Drosophila

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Inferring the evolutionary histories of the Adh and Adh-dup loci in Drosophila melanogaster from patterns of polymorphism and divergence

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

deadpan, an essential pan-neural gene in Drosophila, encodes a helix-loop-helix protein similar to the hairy gene product

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Quantitative analysis of bristle number in Drosophila mutants identifies genes involved in neural development.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Regulatory elements of the floral homeotic gene AGAMOUS identified by phylogenetic footprinting and shadowing

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

A single p450 allele associated with insecticide resistance in Drosophila.

29 October 2018

1 reference

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Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Novel Notch alleles reveal a Deltex-dependent pathway repressing neural fate.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

High-resolution haplotype structure in the human genome

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

split ends encodes large nuclear proteins that regulate neuronal cell fate and axon extension in the Drosophila embryo

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Selective sweep of a newly evolved sperm-specific gene in Drosophila

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Molecular phylogeny and divergence times of drosophilid species

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Genome scans and candidate gene approaches in the study of common diseases and variable drug responses

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1131871

Prospects for whole-genome linkage disequilibrium mapping of common disease genes

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15851675

12 December 2020

inferred from PubMed ID database lookup

Variation is the spice of life

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15851675

12 December 2020

inferred from PubMed ID database lookup

STABILIZING SELECTION DETECTED FOR BRISTLE NUMBER IN DROSOPHILA MELANOGASTER

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15851675

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.0501990102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15851675%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

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release_yqr3civkebemrfgnoiqtj5psl4

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Fatcat

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24 November 2022

mapped directly with Wikidata item

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11 January 2020

PubMed publication ID

15851675

1 reference