Promoter occupancy is a major determinant of chromatin remodeling enzyme requirements (Q33707726)

28 July 2017

title

Promoter occupancy is a major determinant of chromatin remodeling enzyme requirements (English)

1 reference

28 July 2017

Archana Dhasarathy

1

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28 July 2017

Michael P Kladde

series ordinal

2

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28 July 2017

language of work or name

English

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publication date

1 April 2005

1 reference

Molecular and Cellular Biology

28 July 2017

published in

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28 July 2017

volume

25

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28 July 2017

issue

7

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28 July 2017

page(s)

2698-2707

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Recruitment of the NuA4 complex poises the PHO5 promoter for chromatin remodeling and activation

28 July 2017

cites work

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Chromatin disassembly mediated by the histone chaperone Asf1 is essential for transcriptional activation of the yeast PHO5 and PHO8 genes

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Polyphosphate Loss Promotes SNF/SWI- and Gcn5-Dependent Mitotic Induction of PHO5

21 June 2018

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Multiple Mechanistically Distinct Functions of SAGA at the PHO5 Promoter

21 June 2018

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Regulation of chromatin remodeling by inositol polyphosphates

21 June 2018

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Cooperation between complexes that regulate chromatin structure and transcription

21 June 2018

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Transcription activator interactions with multiple SWI/SNF subunits.

21 June 2018

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Increasing the rate of chromatin remodeling and gene activation--a novel role for the histone acetyltransferase Gcn5

21 June 2018

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Promoter targeting of chromatin-modifying complexes.

21 June 2018

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The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.

21 June 2018

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SAGA is an essential in vivo target of the yeast acidic activator Gal4p

21 June 2018

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Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

21 June 2018

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GCN5 dependence of chromatin remodeling and transcriptional activation by the GAL4 and VP16 activation domains in budding yeast

21 June 2018

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Chromatin remodeling enzymes: who's on first?

21 June 2018

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Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylase

21 June 2018

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Ordered recruitment of chromatin modifying and general transcription factors to the IFN-beta promoter

21 June 2018

1 reference

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Artificially recruited TATA-binding protein fails to remodel chromatin and does not activate three promoters that require chromatin remodeling

21 June 2018

1 reference

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Whole-genome expression analysis of snf/swi mutants of Saccharomyces cerevisiae

21 June 2018

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Recruitment of the SWI-SNF chromatin remodeling complex as a mechanism of gene activation by the glucocorticoid receptor tau1 activation domain

21 June 2018

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ATP-dependent chromatin-remodeling complexes.

21 June 2018

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RAP, RAP, open up! New wrinkles for RAP1 in yeast

21 June 2018

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Histone acetyltransferase complexes and their link to transcription

21 June 2018

1 reference

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The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo

21 June 2018

1 reference

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Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding

21 June 2018

1 reference

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Recruitment of the SWI/SNF chromatin remodeling complex by transcriptional activators

21 June 2018

1 reference

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ATP-dependent remodeling and acetylation as regulators of chromatin fluidity

21 June 2018

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The nucleosome remodeling complex, Snf/Swi, is required for the maintenance of transcription in vivo and is partially redundant with the histone acetyltransferase, Gcn5.

21 June 2018

1 reference

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Roles of phosphorylation sites in regulating activity of the transcription factor Pho4.

21 June 2018

1 reference

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Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter.

21 June 2018

1 reference

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Continuous and widespread roles for the Swi-Snf complex in transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Activation domain-specific and general transcription stimulation by native histone acetyltransferase complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

The receptor Msn5 exports the phosphorylated transcription factor Pho4 out of the nucleus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Dissecting the regulatory circuitry of a eukaryotic genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Phosphorylation regulates association of the transcription factor Pho4 with its import receptor Pse1/Kap121.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Absence of Gcn5 HAT activity defines a novel state in the opening of chromatin at the PHO5 promoter in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

SWI-SNF complex participation in transcriptional activation at a step subsequent to activator binding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

ESA1 is a histone acetyltransferase that is essential for growth in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

The yeast SWI-SNF complex facilitates binding of a transcriptional activator to nucleosomal sites in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Signaling phosphate starvation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

C-terminal domains of general regulatory factors Abf1p and Rap1p in Saccharomyces cerevisiae display functional similarity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Tetrahymena histone acetyltransferase A: a homolog to yeast Gcn5p linking histone acetylation to gene activation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Regulation of PHO4 nuclear localization by the PHO80-PHO85 cyclin-CDK complex.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

A nucleosome precludes binding of the transcription factor Pho4 in vivo to a critical target site in the PHO5 promoter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Experimental analysis of chromatin function in transcription control.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Isolation and Characterization of Acid Phosphatase Mutants in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Specific DNA binding of GAL4, a positive regulatory protein of yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Nuclease hypersensitive regions with adjacent positioned nucleosomes mark the gene boundaries of the PHO5/PHO3 locus in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Isolation, physical characterization and expression analysis of the Saccharomyces cerevisiae positive regulatory gene PHO4

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

The two positively acting regulatory proteins PHO2 and PHO4 physically interact with PHO5 upstream activation regions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

A yeast ARS-binding protein activates transcription synergistically in combination with other weak activating factors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Evidence that SNF2/SWI2 and SNF5 activate transcription in yeast by altering chromatin structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Nucleosomes unfold completely at a transcriptionally active promoter.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Modifying gene expression programs by altering core promoter chromatin architecture.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061642

Global role for chromatin remodeling enzymes in mitotic gene expression

30 October 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767675

12 December 2020

Coordination of PIC Assembly and Chromatin Remodeling During Differentiation-Induced Gene Activation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767675

12 December 2020

Reconstitution of nucleosome positioning, remodeling, histone acetylation, and transcriptional activation on the PHO5 promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767675

12 December 2020

Responses of four yeast genes to changes in the transcriptional machinery are determined by their promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767675

12 December 2020

RNA polymerase II holoenzyme recruitment is sufficient to remodel chromatin at the yeast PHO5 promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767675

12 December 2020

Chromatin remodeling: a marriage between two families?

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767675

12 December 2020

Activation domain-mediated targeting of the SWI/SNF complex to promoters stimulates transcription from nucleosome arrays

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767675

12 December 2020

10.1128/MCB.25.7.2698-2707.2005

Identifiers

DOI

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28 July 2017

1 reference

28 July 2017

1 reference