Gene3D: comprehensive structural and functional annotation of genomes (Q33306787)

25 July 2017

title

Gene3D: comprehensive structural and functional annotation of genomes (English)

1 reference

25 July 2017

3

1 reference

25 July 2017

4

Paul Kellam

0 references

Christine Orengo

series ordinal

7

object named as

Christine Orengo

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Jonathan Lees

series ordinal

2

object named as

Jonathan Lees

1 reference

25 July 2017

1

Corin Yeats

1 reference

25 July 2017

Nigel Martin

5

1 reference

25 July 2017

Xinhui Liu

series ordinal

6

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25 July 2017

language of work or name

English

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publication date

21 November 2007

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25 July 2017

published in

Nucleic Acids Research

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25 July 2017

volume

36

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25 July 2017

issue

Database issue

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25 July 2017

page(s)

D414-8

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Predicting protein function with hierarchical phylogenetic profiles: the Gene3D Phylo-Tuner method applied to eukaryotic genomes

25 July 2017

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1 reference

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21 June 2018

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Towards a comprehensive structural coverage of completed genomes: a structural genomics viewpoint

21 June 2018

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21 June 2018

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Clustering by passing messages between data points

21 June 2018

1 reference

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution

21 June 2018

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21 June 2018

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21 June 2018

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Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 June 2018

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21 June 2018

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From genomics to chemical genomics: new developments in KEGG

21 June 2018

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21 June 2018

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Pfam: clans, web tools and services

21 June 2018

1 reference

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Mapping PDB chains to UniProtKB entries.

21 June 2018

1 reference

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Identification and distribution of protein families in 120 completed genomes using Gene3D.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238970

Integr8 and Genome Reviews: integrated views of complete genomes and proteomes

21 June 2018

1 reference

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The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes

21 June 2018

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Announcing the worldwide Protein Data Bank

21 June 2018

1 reference

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The COG database: an updated version includes eukaryotes

21 June 2018

1 reference

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Enzyme function less conserved than anticipated.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238970

Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238970

Gene ontology: tool for the unification of biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238970

Profile hidden Markov models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238970

SCOP: a structural classification of proteins database for the investigation of sequences and structures

21 June 2018

1 reference

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21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238970

How Well is Enzyme Function Conserved as a Function of Pairwise Sequence Identity?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238970

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31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18032434

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM1019

1 reference

journals/nar/YeatsLRKMLO08

25 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

25 July 2017

1 reference