Molecular evolution and phylogenetic utility of the petD group II intron: a case study in basal angiosperms (Q31122337)

29 June 2017

title

Molecular evolution and phylogenetic utility of the petD group II intron: a case study in basal angiosperms (English)

1 reference

29 June 2017

1 reference

0 references

1 reference

2

Thomas Borsch

1 reference

29 June 2017

Cornelia Löhne

1

1 reference

29 June 2017

publication date

20 October 2004

1 reference

Molecular Biology and Evolution

29 June 2017

published in

1 reference

29 June 2017

volume

22

1 reference

29 June 2017

issue

2

1 reference

29 June 2017

page(s)

317-332

1 reference

Patterns of nucleotide substitution in angiosperm cpDNA trnL (UAA)-trnF (GAA) regions

29 June 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

The ins and outs of group II introns

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Noncoding plastid trnT-trnF sequences reveal a well resolved phylogeny of basal angiosperms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Molecular phylogenetics of Melastomataceae and Memecylaceae: implications for character evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

A three-dimensional perspective on exon binding by a group II self-splicing intron

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Concepts and tests of homology in the cladistic paradigm

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Domain 5 interacts with domain 6 and influences the second transesterification reaction of group II intron self-splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Organization and post-transcriptional processing of the psb B operon from chloroplasts of Populus deltoides

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Evolution of a noncoding region of the chloroplast genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Analysis of the Amborella trichopoda chloroplast genome sequence suggests that amborella is not a basal angiosperm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Evolutionary significance of an unusual chloroplast DNA inversion found in two basal angiosperm lineages

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

The size distribution of insertions and deletions in human and rodent pseudogenes suggests the logarithmic gap penalty for sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Analysis of DNA sequence data: phylogenetic inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Angiosperm phylogeny based on matK sequence information

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Phylogeny of the Proteaceae based on atpB and atpB-rbcL intergenic spacer region sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

MRBAYES: Bayesian inference of phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

The Evolution of Non-Coding Chloroplast DNA and Its Application in Plant Systematics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Group II introns as phylogenetic tools: structure, function, and evolutionary constraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Molecular evolution and phylogenetic utility of the chloroplast rpl16 intron in Chusquea and the Bambusoideae (Poaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Hairpins create minute inversions in non-coding regions of chloroplast DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Evolution of the mitochondrial rps3 intron in perennial and annual angiosperms and homology to nad5 intron 1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Structure and activities of group II introns

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Comparative and functional anatomy of group II catalytic introns—a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Disruption of the petB-petD intergenic region in tobacco chloroplasts affects petD RNA accumulation and translation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

PRAP-computation of Bremer support for large data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

MODELTEST: testing the model of DNA substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

The gain of three mitochondrial introns identifies liverworts as the earliest land plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

The earliest angiosperms: evidence from mitochondrial, plastid and nuclear genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

The maize plastid psbB-psbF-petB-petD gene cluster: spliced and unspliced petB and petD RNAs encode alternative products.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Evolution of compensatory substitutions through G.U intermediate state in Drosophila rRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Phylogenetic analysis of Magnoliales and Myristicaceae based on multiple data sets: implications for character evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

The plastid chromosome of spinach (Spinacia oleracea): complete nucleotide sequence and gene organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Incorporation, relative homoplasy, and effect of gap characters in sequence-based phylogenetic analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

Rapid splicing and stepwise processing of a transcript from the psbB operon in tobacco chloroplasts: determination of the intron sites in petB and petD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

The root of the angiosperms revisited

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSI019

MEGA2: molecular evolutionary genetics analysis software

21 January 2018

1 reference

20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1093/BIOINFORMATICS/17.12.1244

Identifiers

DOI

10.1093/MOLBEV/MSI019

1 reference

29 June 2017

1 reference