De novo and inverse folding predictions of protein structure and dynamics (Q30194891)

10 June 2017

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title

De novo and inverse folding predictions of protein structure and dynamics (English)

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protein structure prediction

10 June 2017

main subject

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1

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10 June 2017

Kolinski A

2

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10 June 2017

Skolnick J

series ordinal

3

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10 June 2017

publication date

1 August 1993

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Journal of Computer - Aided Molecular Design

10 June 2017

published in

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10 June 2017

volume

7

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10 June 2017

issue

4

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10 June 2017

page(s)

397-438

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Protein engineering. The design, synthesis and characterization of factitious proteins

10 June 2017

cites work

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Residue contacts in protein structures and implications for protein folding.

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Structure of oxidized poplar plastocyanin at 1.6 A resolution

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The frequency of ion-pair substructures in proteins is quantitatively related to electrostatic potential: a statistical model for nonbonded interactions

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12 December 2020

A Three-Dimensional Model of the Myoglobin Molecule Obtained by X-Ray Analysis

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Cumulative site-directed charge-change replacements in bacteriophage T4 lysozyme suggest that long-range electrostatic interactions contribute little to protein stability

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12 December 2020

Detection of native-like models for amino acid sequences of unknown three-dimensional structure in a data base of known protein conformations

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12 December 2020

Computer simulation of protein folding

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12 December 2020

Protein database searches for multiple alignments

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12 December 2020

Dynamic Monte Carlo study of the folding of a six-stranded Greek key globular protein

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12 December 2020

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12 December 2020

Why do globular proteins fit the limited set of folding patterns?

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12 December 2020

A new approach to protein fold recognition

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12 December 2020

Novel method for the rapid evaluation of packing in protein structures

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12 December 2020

Sequence-structure matching in globular proteins: application to supersecondary and tertiary structure determination

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12 December 2020

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12 December 2020

Calculation of protein tertiary structure

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12 December 2020

Dynamic Monte Carlo simulations of globular protein folding. Model studies of in vivo assembly of four helix bundles and four member beta-barrels

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12 December 2020

Identification of protein sequence homology by consensus template alignment

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12 December 2020

Molten globule intermediates and protein folding

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How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins

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12 December 2020

A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

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12 December 2020

A simplified representation of protein conformations for rapid simulation of protein folding

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A general method applicable to the search for similarities in the amino acid sequence of two proteins

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12 December 2020

An analysis of incorrectly folded protein models. Implications for structure predictions.

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Hydrophobicity scales and computational techniques for detecting amphipathic structures in proteins

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The molten globule state as a clue for understanding the folding and cooperativity of globular-protein structure.

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12 December 2020

Identification of predictive sequence motifs limited by protein structure data base size

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12 December 2020

Lattice model for globular protein three-dimensional structure

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12 December 2020

A flexible multiple sequence alignment program

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12 December 2020

Polymer principles in protein structure and stability.

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Monte Carlo studies on equilibrium globular protein folding. I. Homopolymeric lattice models of beta-barrel proteins

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12 December 2020

Conformations of folded proteins in restricted spaces

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12 December 2020

SIRIUS. An automated method for the analysis of the preferred packing arrangements between protein groups

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Computing tertiary structures of proteins

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Folding of peptide fragments comprising the complete sequence of proteins. Models for initiation of protein folding. I. Myohemerythrin

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A strategy for the rapid multiple alignment of protein sequences. Confidence levels from tertiary structure comparisons

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On the formation of protein tertiary structure on a computer

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12 December 2020

Simulations of the folding pathway of triose phosphate isomerase-type alpha/beta barrel proteins

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12 December 2020

Evidence for a molten globule state as a general intermediate in protein folding

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12 December 2020

A search for the most stable folds of protein chains

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12 December 2020

Monte Carlo studies on equilibrium globular protein folding. II. Beta-barrel globular protein models

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12 December 2020

Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

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12 December 2020

Metastability of the folded states of globular proteins

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29 Computer-assisted rational drug design

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A method for multiple sequence alignment with gaps.

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Protein folding. Effect of packing density on chain conformation

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12 December 2020

Identifiers

DOI

10.1007/BF02337559

1 reference

journals/jcamd/GodzikKS93

10 June 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference