Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast (Q27936978)

1 December 2016

title

Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast (English)

1 reference

Protein phosphatase regulator GIP4 YAL031C

1 December 2016

main subject

1 reference

Hfi1p YPL254W

1 reference

Ubiquitin-protein transferase activating protein CDC20 YGL116W

1 reference

Histone acetyltransferase GCN5 YGR252W

1 reference

Swi3p YJL176C

1 reference

RSC chromatin remodeling complex ATPase subunit STH1 YIL126W

1 reference

Type 1 serine/threonine-protein phosphatase catalytic subunit GLC7 YER133W

1 reference

Mad3p YJL013C

1 reference

Chromatin-binding transcription regulator ADA2 YDR448W

1 reference

Sol1p YNR034W

1 reference

Rtt102p YGR275W

1 reference

Johannes Graumann

1

0 references

author name string

Leslie A Dunipace

2

0 references

Jae Hong Seol

3

0 references

W Hayes McDonald

4

0 references

John R Yates

5

0 references

Barbara J Wold

6

0 references

Raymond J Deshaies

Molecular & Cellular Proteomics

7

0 references

language of work or name

English

0 references

publication date

March 2004

0 references

published in

1 reference

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

1 December 2016

volume

3

0 references

issue

3

0 references

page(s)

226-37

0 references

cites work

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

A comprehensive two-hybrid analysis to explore the yeast protein interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Global analysis of protein activities using proteome chips

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Functional organization of the yeast proteome by systematic analysis of protein complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low-femtomole level.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Direct analysis of protein complexes using mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

A proteomics approach to understanding protein ubiquitination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Skp1 forms multiple protein complexes, including RAVE, a regulator of V-ATPase assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Implication of a novel multiprotein Dam1p complex in outer kinetochore function

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Isolation of monoclonal antibodies specific for human c-myc proto-oncogene product

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

A generic protein purification method for protein complex characterization and proteome exploration

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Code developments to improve the efficiency of automated MS/MS spectra interpretation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

SGD: Saccharomyces Genome Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

MIPS: a database for protein sequences, homology data and yeast genome information

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

MIPS: a database for genomes and protein sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

The GRID: the General Repository for Interaction Datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

YPD-A database for the proteins of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

The ADA complex is a distinct histone acetyltransferase complex in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

The novel SLIK histone acetyltransferase complex functions in the yeast retrograde response pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Functional profiling of the Saccharomyces cerevisiae genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Two homologous zinc finger genes identified by multicopy suppression in a SNF1 protein kinase mutant of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Functional analysis of the stress response element and its role in the multistress response of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Histone acetylation at promoters is differentially affected by specific activators and repressors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Role for ADA/GCN5 products in antagonizing chromatin-mediated transcriptional repression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Revisiting the codon adaptation index from a whole-genome perspective: analyzing the relationship between gene expression and codon occurrence in yeast using a variety of models

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Chromatin remodeling enzymes: who's on first?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

TFIIF-TAF-RNA polymerase II connection

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

The genome-wide localization of Rsc9, a component of the RSC chromatin-remodeling complex, changes in response to stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Subunits of the yeast SWI/SNF complex are members of the actin-related protein (ARP) family

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Phospho-regulation of kinetochore-microtubule attachments by the Aurora kinase Ipl1p

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Pol kappa: A DNA polymerase required for sister chromatid cohesion.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

The budding yeast proteins Spc24p and Spc25p interact with Ndc80p and Nuf2p at the kinetochore and are important for kinetochore clustering and checkpoint control

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Reproducibility of quantitative proteomic analyses of complex biological mixtures by multidimensional protein identification technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

Efficient and rapid affinity purification of proteins using recombinant fusion proteases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300099-MCP200

10.1074/MCP.M300099-MCP200

21 January 2018

Identifiers

DOI

0 references

1 reference