Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolution (Q27733411)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolution	scientific article

Statements

scholarly article

0 references

Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolution (English)

0 references

Bacillus stearothermophilus

object named as

Bacillus stearothermophilus

1 reference

based on heuristic

inferred from title

Venkatraman Ramakrishnan

object named as

V Ramakrishnan

2

0 references

author name string

C Davies

1

0 references

S W White

3

0 references

publication date

15 September 1996

0 references

0 references

4

0 references

9

0 references

1093-104

0 references

Structures of prokaryotic ribosomal proteins: implications for RNA binding and evolution

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Structure of the C-terminal domain of the ribosomal protein L7/L12 from Escherichia coli at 1.7 A

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Crystal structure of a prokaryotic ribosomal protein

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Ribosomal protein L6: structural evidence of gene duplication from a primitive RNA binding protein

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Solution Structure of Prokaryotic Ribosomal Protein S17 by High-Resolution NMR Spectroscopy†

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Site-directed hydroxyl radical probing of the rRNA neighborhood of ribosomal protein S5.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The 70S Escherichia coli ribosome at 23 A resolution: fitting the ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

A model of protein synthesis based on cryo-electron microscopy of the E. coli ribosome

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Approaching atomic resolution in crystallography of ribosomes

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Binding sites for ribosomal proteins S8 and S15 in the 16 S RNA of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Interaction of ribosomal proteins S6, S8, S15 and S18 with the central domain of 16 S ribosomal RNA from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Interaction of ribosomal proteins, S6, S8, S15 and S18 with the central domain of 16 S ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Cold-sensitive growth of a mutants ofEscherichia coli with an altered ribosomal protein S8: Analysis of revertants

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

A complete mapping of the proteins in the small ribosomal subunit of Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Crosslinks between ribosomal proteins of 30S subunits in 70S tight couples and in 30S subunits

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Protein binding sites on Escherichia coli 16S ribosomal RNA; RNA regions that are protected by proteins S7, S9 and S19, and by proteins S8, S15 and S17.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Nucleotides In 16S rRNA that are required in unmodified form for features recognized by ribosomal protein S8

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The localization of multiple sites on 16S RNA which are cross-linked to proteins S7 and S8 in Escherichia coli 30S ribosomal subunits by treatment with 2-iminothiolane

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

RNA-protein cross-linking in Escherichia coli 30S ribosomal subunits; determination of sites on 16S RNA that are cross-linked to proteins S3, S4, S5, S7, S8, S9, S11, S13, S19 and S21 by treatment with methyl p-azidophenyl acetimidate

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Crosslinking of ribosomal proteins S4, S5, S7, S8, S11, S12 and S18 to domains 1 and 2 of 16S rRNA in the Escherichia coli 30S particle.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Site-directed mutagenesis of the binding site for ribosomal protein S8 within 16S ribosomal RNA from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Binding of Escherichia coli ribosomal protein S8 to 16 S rRNA. A model for the interaction and the tertiary structure of the RNA binding site.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Interaction of Escherichia coli ribosomal protein S8 with its binding sites in ribosomal RNA and messenger RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The structure and organization of the 16S ribosomal RNA gene from the archaebacterium Thermoplasma acidophilum

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Minimal 16S rRNA binding site and role of conserved nucleotides in Escherichia coli ribosomal protein S8 recognition.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The binding site for ribosomal protein S8 in 16S rRNA and spc mRNA from Escherichia coli: minimum structural requirements and the effects of single bulged bases on S8-RNA interaction

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Role of conserved nucleotides in building the 16S rRNA binding site of E. coli ribosomal protein S8.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

In vitro expression of Escherichia coli ribosomal protein genes: autogenous inhibition of translation

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Escherichia coli ribosomal protein S8 feedback regulates part of spc operon

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Retroregulation of the synthesis of ribosomal proteins L14 and L24 by feedback repressor S8 in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Translational regulation by ribosomal protein S8 in Escherichia coli: structural homology between rRNA binding site and feedback target on mRNA

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Translational regulation of the spc operon in Escherichia coli. Identification and structural analysis of the target site for S8 repressor protein

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Solvent content of protein crystals

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Primary structures of ribosomal proteins from the archaebacterium Halobacterium marismortui and the eubacterium Bacillus stearothermophilus.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Free R value: a novel statistical quantity for assessing the accuracy of crystal structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Protein-rRNA binding features and their structural and functional implications in ribosomes as determined by cross-linking studies.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Ribosomal protein L9 interactions with 23 S rRNA: the use of a translational bypass assay to study the effect of amino acid substitutions.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

RNA-binding domain of the A protein component of the U1 small nuclear ribonucleoprotein analyzed by NMR spectroscopy is structurally similar to ribosomal proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

OB(oligonucleotide/oligosaccharide binding)-fold: common structural and functional solution for non-homologous sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

NMR solution structure of a dsRNA binding domain from Drosophila staufen protein reveals homology to the N-terminal domain of ribosomal protein S5

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Structure of the dsRNA binding domain of E. coli RNase III.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Structure and topological symmetry of the glyphosate target 5-enolpyruvylshikimate-3-phosphate synthase: a distinctive protein fold

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The crystal structure of Haelll methyltransferase covalently complexed to DNA: An extrahelical cytosine and rearranged base pairing

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

X-ray structure of the DNase I-d(GGTATACC)2 complex at 2.3 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Structure of a complex of catabolite gene activator protein and cyclic AMP refined at 2.5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Binding of Escherichia coli ribosomal protein S8 to 16S rRNA: kinetic and thermodynamic characterization.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Mutagenesis of ribosomal protein S8 from Escherichia coli: expression, stability, and RNA-binding properties of S8 mutants

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Mutagenesis of ribosomal protein S8 from Escherichia coli: defects in regulation of the spc operon

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Assessment by sedimentation equilibrium analysis of a heterologous macromolecular interaction in the presence of self-association: interaction of S5 with S8

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Crystal structure at 1.92 A resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Use of T7 RNA polymerase to direct expression of cloned genes

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The CCP4 suite: programs for protein crystallography

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Diffraction methods for biological macromolecules. Interactive computer graphics: FRODO

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Crystallographic refinement by simulated annealing. Application to a 2.8 A resolution structure of aspartate aminotransferase.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Assessment of protein models with three-dimensional profiles

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

PROMOTIF--a program to identify and analyze structural motifs in proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The complete amino acid sequence of ribosomal protein S8 from Thermus thermophilus

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Determination of the amino-acid sequence of the ribosomal protein S8 of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Spectinomycin operon of Micrococcus luteus: evolutionary implications of organization and novel codon usage

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Genes for the eight ribosomal proteins are clustered on the chloroplast genome of tobacco (Nicotiana tabacum): similarity to the S10 and spc operons of Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Rapid evolution of the plastid translational apparatus in a nonphotosynthetic plant: loss or accelerated sequence evolution of tRNA and ribosomal protein genes

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Structure and organization of Marchantia polymorpha chloroplast genome. III. Gene organization of the large single copy region from rbcL to trnI(CAU).

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

The cyanelle S10 spc ribosomal protein gene operon from Cyanophora paradoxa

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2896%2900115-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1016/S0969-2126(96)00115-3

0 references

PubMed publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q27733411&oldid=1645131226"