Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution (Q27639217)

3

0 references

author name string

Curt A Davey

1

0 references

David F Sargent

2

0 references

Armin W Maeder

4

0 references

Timothy J Richmond

Journal of Molecular Biology

5

0 references

language of work or name

English

0 references

publication date

21 June 2002

0 references

published in

0 references

volume

319

0 references

issue

5

0 references

page(s)

1097-113

0 references

cites work

Crystal structure of the nucleosome core particle at 2.8 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

The atomic structure of the nucleosome core particle

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Asymmetries in the nucleosome core particle at 2.5 A resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Crystal structure of a nucleosome core particle containing the variant histone H2A.Z

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Crystal structure of trp repressor/operator complex at atomic resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Determination of the nuclear magnetic resonance solution structure of an Antennapedia homeodomain-DNA complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Crystal structure of a bZIP/DNA complex at 2.2 A: determinants of DNA specific recognition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Water release associated with specific binding of gal repressor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Sequence-specific DNA-binding dominated by dehydration

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

The role of water in protein-DNA interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

An analysis of the relationship between hydration and protein-DNA interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Amino acid-base interactions: a three-dimensional analysis of protein-DNA interactions at an atomic level

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Protein-DNA interactions: A structural analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Nonsequence-specific DNA recognition: a structural perspective

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Mobile nucleosomes--a general behavior

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Positioning and stability of nucleosomes on MMTV 3'LTR sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Between objectivity and subjectivity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Ordered water structure around a B-DNA dodecamer. A quantitative study

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Hydration of the phosphate group in double-helical DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

The Entropic Cost of Bound Water in Crystals and Biomolecules

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

The role of the alpha-helix dipole in protein function and structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Cation-pi interactions in structural biology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

X-ray crystal structure and characterization of halide-binding sites of human myeloperoxidase at 1.8 A resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

The main role of the sequence-dependent DNA elasticity in determining the free energy of nucleosome formation on telomeric DNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Chromatin and core particles formed from the inner histones and synthetic polydeoxyribonucleotides of defined sequence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Nucleosome cores reconstituted from poly (dA-dT) and the octamer of histones

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Can one measure the free energy of binding of the histone octamer to different DNA sequences by salt-dependent reconstitution?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Nucleosome positioning is determined by the (H3-H4)2 tetramer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Protein-DNA recognition complexes: conservation of structure and binding energy in the transition state

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Wet and dry interfaces: the role of solvent in protein-protein and protein-DNA recognition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Critical role for the histone H4 N terminus in nucleosome remodeling by ISWI.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Energetics and affinity of the histone octamer for defined DNA sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

The histone tails of the nucleosome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Charge density-dependent strength of hydration and biological structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Structural chemistry and biology of manganese metalloenzymes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Architecture of RNA polymerase II and implications for the transcription mechanism

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Preparation of nucleosome core particle from recombinant histones

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Processing of X-ray diffraction data collected in oscillation mode

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Improved methods for building protein models in electron density maps and the location of errors in these models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900386-8

10.1016/S0022-2836(02)00386-8

7 January 2021

Identifiers

DOI

1 reference

Consolidated OpenCitations Corpus – April 2017

1 reference

Consolidated OpenCitations Corpus – April 2017

PubMed publication ID

12079350

1 reference

Consolidated OpenCitations Corpus – April 2017