RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements (Q24812958)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15980564%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

title

RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements (English)

1 reference

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13 January 2020

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15980564%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Enrique Merino

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15980564%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

author name string

Enrique Merino

series ordinal

2

0 references

language of work or name

English

0 references

publication date

1 July 2005

1 reference

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13 January 2020

published in

Nucleic Acids Research

1 reference

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13 January 2020

volume

33

1 reference

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13 January 2020

issue

Web Server issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15980564%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

page(s)

W690-2

1 reference

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New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

13 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

Metabolite-binding RNA domains are present in the genes of eukaryotes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

Rfam: an RNA family database

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

KEGG: kyoto encyclopedia of genes and genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

A genomic perspective on protein families

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

Combining evidence using p-values: application to sequence homology searches

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

Riboswitch finder--a tool for identification of riboswitch RNAs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

The riboswitch control of bacterial metabolism

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

GeConT: gene context analysis.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

Whole proteome prokaryote phylogeny without sequence alignment: a K-string composition approach

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160206

Conserved regulatory motifs in bacteria: riboswitches and beyond

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15980564

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Transcription attenuation: a highly conserved regulatory strategy used by bacteria

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15980564

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKI445

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15980564%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/Abreu-GoodgerM05

13 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15980564%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

PubMed publication ID

15980564

1 reference