Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites (Q24682593)

6

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Kerstin Lindblad-Toh

4

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Manolis Kellis

5

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Andreas Gnirke

3

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Tarjei S Mikkelsen

2

object named as

Tarjei S Mikkelsen

0 references

Xiaohui Xie

Proceedings of the National Academy of Sciences of the United States of America

1

object named as

Xiaohui Xie

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language of work or name

English

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publication date

24 April 2007

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published in

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volume

104

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issue

17

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page(s)

7145-50

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cites work

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Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

7 April 2017

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Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach

7 April 2017

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Highly conserved non-coding sequences are associated with vertebrate development

7 April 2017

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A gene atlas of the mouse and human protein-encoding transcriptomes

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The sequence of the stem and flanking sequences at the 3' end of histone mRNA are critical determinants for the binding of the stem-loop binding protein

7 April 2017

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The neuron-restrictive silencer factor (NRSF): a coordinate repressor of multiple neuron-specific genes

7 April 2017

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REST: A mammalian silencer protein that restricts sodium channel gene expression to neurons

7 April 2017

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The stem-loop structure at the 3' end of histone mRNA is necessary and sufficient for regulation of histone mRNA stability

7 April 2017

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Identification of new genes regulated by the Crt1 transcription factor, an effector of the DNA damage checkpoint pathway in Saccharomyces cerevisiae

7 April 2017

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The DNA replication and damage checkpoint pathways induce transcription by inhibition of the Crt1 repressor

7 April 2017

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Functional genomics of the cilium, a sensory organelle

7 April 2017

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Insulators: exploiting transcriptional and epigenetic mechanisms

7 April 2017

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Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes

7 April 2017

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CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease

7 April 2017

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Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

7 April 2017

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The protein CTCF is required for the enhancer blocking activity of vertebrate insulators

7 April 2017

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In vivo enhancer analysis of human conserved non-coding sequences

7 April 2017

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A distal enhancer and an ultraconserved exon are derived from a novel retroposon

7 April 2017

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Comparative genomics modeling of the NRSF/REST repressor network: from single conserved sites to genome-wide repertoire

7 April 2017

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Systematic analysis of head-to-head gene organization: evolutionary conservation and potential biological relevance

28 September 2017

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The many faces of REST oversee epigenetic programming of neuronal genes

28 September 2017

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Conserved non-genic sequences - an unexpected feature of mammalian genomes

28 September 2017

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An abundance of bidirectional promoters in the human genome

28 September 2017

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A consensus motif in the RFX DNA binding domain and binding domain mutants with altered specificity

28 September 2017

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The discovery, positioning and verification of a set of transcription-associated motifs in vertebrates

28 September 2017

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0701811104

Comparative genomics reveals unusually long motifs in mammalian genomes.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0701811104

Analysis of xbx genes in C. elegans

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0701811104

21 January 2018

Identifiers

DOI

10.1073/PNAS.0701811104

1 reference

ADS bibcode

2007PNAS..104.7145X

0 references

1 reference

1 reference

PubMed publication ID

17442748

1 reference