Were vertebrates octoploid? (Q24676010)

Philosophical Transactions of the Royal Society B

Europe PubMed Central

title

Were vertebrates octoploid? (English)

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Rebecca F Furlong

1

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author name string

Peter W H Holland

series ordinal

2

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language of work or name

English

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publication date

29 April 2002

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published in

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volume

357

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issue

1420

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page(s)

531-44

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cites work

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A phylogenetic tree of the Wnt genes based on all available full-length sequences, including five from the cephalochordate amphioxus.

28 September 2017

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Phylogenetic analysis of T-Box genes demonstrates the importance of amphioxus for understanding evolution of the vertebrate genome.

28 September 2017

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28 September 2017

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Evolutionary conservation of the presumptive neural plate markers AmphiSox1/2/3 and AmphiNeurogenin in the invertebrate chordate amphioxus.

28 September 2017

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Genes expressed in the amphioxus notochord revealed by EST analysis

28 September 2017

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Gene and genome duplications in vertebrates: the one-to-four (-to-eight in fish) rule and the evolution of novel gene functions

28 September 2017

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Gene duplication: past, present and future

28 September 2017

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Genomic structure of the amphioxus calcium vector protein

28 September 2017

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Vertebrate genome evolution: a slow shuffle or a big bang?

28 September 2017

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The chromosomal duplication model of the major histocompatibility complex

28 September 2017

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Sequence analysis of an amphioxus cosmid containing a gene homologous to members of the aldo-keto reductase gene superfamily

28 September 2017

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Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history

28 September 2017

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Characterization of an amphioxus paired box gene, AmphiPax2/5/8: developmental expression patterns in optic support cells, nephridium, thyroid-like structures and pharyngeal gill slits, but not in the midbrain-hindbrain boundary region.

28 September 2017

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The evolution of the hedgehog gene family in chordates: insights from amphioxus hedgehog.

28 September 2017

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The ParaHox gene cluster is an evolutionary sister of the Hox gene cluster.

28 September 2017

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Gene number in an invertebrate chordate, Ciona intestinalis

28 September 2017

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Dystrophins in vertebrates and invertebrates

28 September 2017

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An Estimate of Divergence Time of Parazoa and Eumetazoa and That of Cephalochordata and Vertebrata by Aldolase and Triose Phosphate Isomerase Clocks

28 September 2017

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Ligand binding was acquired during evolution of nuclear receptors

28 September 2017

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Sequence and embryonic expression of the amphioxus engrailed gene (AmphiEn): the metameric pattern of transcription resembles that of its segment-polarity homolog in Drosophila.

28 September 2017

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Two cholinesterase activities and genes are present in amphioxus

28 September 2017

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Methylation of genomes and genes at the invertebrate-vertebrate boundary

28 September 2017

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Structure and expression of the insulin-like peptide receptor from amphioxus.

28 September 2017

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Chromosomal localization of the proteasome Z subunit gene reveals an ancient chromosomal duplication involving the major histocompatibility complex

28 September 2017

1 reference

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Conservation of Brachyury (T) genes in amphioxus and vertebrates: developmental and evolutionary implications.

28 September 2017

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Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse

28 September 2017

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Archetypal organization of the amphioxus Hox gene cluster.

28 September 2017

1 reference

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Gene number, noise reduction and biological complexity

28 September 2017

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Proprotein convertases in amphioxus: predicted structure and expression of proteases SPC2 and SPC3

28 September 2017

1 reference

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An amphioxus Pax gene, AmphiPax-1, expressed in embryonic endoderm, but not in mesoderm: implications for the evolution of class I paired box genes

28 September 2017

1 reference

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Sequence and expression of amphioxus alkali myosin light chain (AmphiMLC-alk) throughout development: implications for vertebrate myogenesis

28 September 2017

1 reference

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Evolution of the insulin superfamily: cloning of a hybrid insulin/insulin-like growth factor cDNA from amphioxus

28 September 2017

1 reference

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Gen(om)e duplications in the evolution of early vertebrates

28 September 2017

1 reference

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Characterization of two amphioxus Wnt genes (AmphiWnt4 and AmphiWnt7b) with early expression in the developing central nervous system

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Left-right asymmetric expression of BbPtx, a Ptx-related gene, in a lancelet species and the developmental left-sidedness in deuterostomes.

30 May 2018

1 reference

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Exon structure of the nuclear factor I DNA-binding domain from C. elegans to mammals

30 May 2018

1 reference

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Sequence and developmental expression of amphioxus AmphiNk2-1: insights into the evolutionary origin of the vertebrate thyroid gland and forebrain

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

An amphioxus snail gene: expression in paraxial mesoderm and neural plate suggests a conserved role in patterning the chordate embryo.

30 May 2018

1 reference

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Amphioxus AmphiDRAL encoding a LIM-domain protein: expression in the epidermis but not in the presumptive neuroectoderm

30 May 2018

1 reference

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AmphiBMP2/4, an amphioxus bone morphogenetic protein closely related to Drosophila decapentaplegic and vertebrate BMP2 and BMP4: insights into evolution of dorsoventral axis specification

30 May 2018

1 reference

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Characterization of AmphiF-spondin reveals the modular evolution of chordate F-spondin genes.

30 May 2018

1 reference

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Phylogenetic tests of the hypothesis of block duplication of homologous genes on human chromosomes 6, 9, and 1.

30 May 2018

1 reference

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Gene and domain duplication in the chordate Otx gene family: insights from amphioxus Otx.

30 May 2018

1 reference

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Characterization and developmental expression of AmphiNk2-2, an NK2 class homeobox gene from Amphioxus. (Phylum Chordata; Subphylum Cephalochordata).

30 May 2018

1 reference

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Tripartite organization of the ancestral chordate brain and the antiquity of placodes: insights from ascidian Pax-2/5/8, Hox and Otx genes.

30 May 2018

1 reference

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Molecular evolution of amphioxus fructose-1,6-bisphosphate aldolase

30 May 2018

1 reference

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Sex and meiosis in autotetraploid Pacific oyster, Crassostrea gigas (Thunberg).

30 May 2018

1 reference

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engrailed duplication events during the evolution of barnacles

30 May 2018

1 reference

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A comparison of evolutionary rates of the two major kinds of superoxide dismutase

30 May 2018

1 reference

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Complex history of a chromosomal paralogy region: insights from amphioxus aromatic amino acid hydroxylase genes and insulin-related genes

30 May 2018

1 reference

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Characterization and developmental expression of the amphioxus homolog of Notch (AmphiNotch): evolutionary conservation of multiple expression domains in amphioxus and vertebrates.

28 November 2018

1 reference

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AmphiPax3/7, an amphioxus paired box gene: insights into chordate myogenesis, neurogenesis, and the possible evolutionary precursor of definitive vertebrate neural crest.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Characterization of a microsomal retinol dehydrogenase gene from amphioxus: retinoid metabolism before vertebrates

28 November 2018

1 reference

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Amphioxus goosecoid and the evolution of the head organizer and prechordal plate

28 November 2018

1 reference

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Overlapping expression of amphioxus homologs of the thyroid transcription factor-1 gene and thyroid peroxidase gene in the endostyle: insight into evolution of the thyroid gland

28 November 2018

1 reference

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Developmental expression of AmphiWnt1, an amphioxus gene in the Wnt1/wingless subfamily.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

An amphioxus Krox gene: insights into vertebrate hindbrain evolution

28 November 2018

1 reference

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Formation of regulator/target gene relationships during evolution

28 November 2018

1 reference

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Amphioxus alcohol dehydrogenase is a class 3 form of single type and of structural conservation but with unique developmental expression.

28 November 2018

1 reference

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Molecular evolution of calmodulin and calmodulin-like genes in the cephalochordate Branchiostoma

28 November 2018

1 reference

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Characterization of an amphioxus wnt gene, AmphiWnt11, with possible roles in myogenesis and tail outgrowth

28 November 2018

1 reference

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Evidence in favour of ancient octaploidy in the vertebrate genome

28 November 2018

1 reference

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Protein tyrosine phosphatases from amphioxus, hagfish, and ray: divergence of tissue-specific isoform genes in the early evolution of vertebrates

28 November 2018

1 reference

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islet reveals segmentation in the Amphioxus hindbrain homolog

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Characterisation and tissue-specific expression of the two keratin subfamilies of intermediate filament proteins in the cephalochordate Branchiostoma

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Protein tyrosine kinase cDNAs from amphioxus, hagfish, and lamprey: isoform duplications around the divergence of cyclostomes and gnathostomes.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

The amphioxus rab GDP-dissociation inhibitor (GDI) gene is neural-specific: implications for the evolution of chordate rab GDI genes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

An amphioxus Msx gene expressed predominantly in the dorsal neural tube

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Genomic organization and evolution of actin genes in the amphioxus Branchiostoma belcheri and Branchiostoma floridae

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

The notion of the Cambrian pananimalia genome and a genomic difference that separated vertebrates from invertebrates

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Eukaryote genome duplication - where's the evidence?

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Conservation of BF-1 expression in amphioxus and zebrafish suggests evolutionary ancestry of anterior cell types that contribute to the vertebrate telencephalon.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Isolation and developmental expression of the amphioxus Pax-6 gene (AmphiPax-6): insights into eye and photoreceptor evolution

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Diversity of the troponin C genes during chordate evolution

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Sequence and developmental expression of AmphiTob, an amphioxus homolog of vertebrate Tob in the PC3/BTG1/Tob family of tumor suppressor genes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Phylogenetic reconstruction of vertebrate Hox cluster duplications

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Characterisation of amphioxus HNF-3 genes: conserved expression in the notochord and floor plate

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Sequence and developmental expression of AmphiDll, an amphioxus Distal-less gene transcribed in the ectoderm, epidermis and nervous system: insights into evolution of craniate forebrain and neural crest.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Duplication of an amphioxus myogenic bHLH gene is independent of vertebrate myogenic bHLH gene duplication

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Gene duplications and the origins of vertebrate development

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1692965

Vertebrate evolution by interspecific hybridisation--are we polyploid?

28 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

The amphioxus Hox cluster: deuterostome posterior flexibility and Hox14

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

Isozymes of a tunicate and a cephalochordate as a test of polyploidisation in chordate evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

Amphioxus type I keratin cDNA and the evolution of intermediate filament genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

Gene loss and gain in the evolution of the vertebrates

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

Is tetralogy true? Lack of support for the "one-to-four rule"

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

Amphioxus Evx Genes: Implications for the Evolution of the Midbrain–Hindbrain Boundary and the Chordate Tailbud

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

Evolution of the prohormone convertases: identification of a homologue of PC6 in the protochordate amphioxus

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

Chromosome banding in Amphibia. IX. The polyploid karyotypes of Odontophrynus americanus and Ceratophrys ornata (Anura, Leptodactylidae)

1 reference

https://pubmed.ncbi.nlm.nih.gov/12028790

12 December 2020

Tetraploidy and the Evolution of Salmonid Fishes

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2001.1035

7 January 2021

Gene duplications in the prototypical cephalochordate amphioxus.

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2001.1035

7 January 2021

Initial sequencing and analysis of the human genome

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2001.1035

7 January 2021

Characterization of amphioxus AmphiWnt8: insights into the evolution of patterning of the embryonic dorsoventral axis

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2001.1035

7 January 2021

Genome sequence of the nematode C. elegans: a platform for investigating biology

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2001.1035

7 January 2021

Identifiers

DOI

10.1098/RSTB.2001.1035

1 reference

1 reference

1 reference

PubMed publication ID

12028790

1 reference