Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation (Q24653622)

11

object named as

K D Hyde

0 references

Pedro Willem Crous

4

object named as

P W Crous

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author name string

Y Zhang

1

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C L Schoch

2

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J Fournier

3

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J H C Woudenberg

6

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K Hirayama

7

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K Tanaka

8

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S B Pointing

9

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J W Spatafora

maintained by WikiProject

10

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language of work or name

English

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publication date

2009

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published in

Studies in Mycology

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volume

64

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page(s)

85-102S5

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1 reference

A class-wide phylogenetic assessment of Dothideomycetes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

A rapid bootstrap algorithm for the RAxML Web servers

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

A multigene phylogeny of the Dothideomycetes using four nuclear loci

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Phylogenetic lineages in the Capnodiales

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Multiple alignment of DNA sequences with MAFFT

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

An evaluation of the monophyly of Massarina based on ribosomal DNA sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

The stem canker (blackleg) fungus, Leptosphaeria maculans, enters the genomic era.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Stagonospora nodorum: cause of stagonospora nodorum blotch of wheat

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Phylogenetic and morphological assessment of two new species of Amniculicola and their allies (Pleosporales).

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Multiple Didymella teleomorphs are linked to the Phoma clematidina morphotype

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Molecular systematics of the marine Dothideomycetes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

On the evolution of the Hysteriaceae and Mytilinidiaceae (Pleosporomycetidae, Dothideomycetes, Ascomycota) using four nuclear genes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Molecular phylogeny of Phoma and allied anamorph genera: towards a reclassification of the Phoma complex

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Didymella pisi sp. nov., the teleomorph of Ascochyta pisi

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

The oldest fossil evidence of animal parasitism by fungi supports a Cretaceous diversification of fungal-arthropod symbioses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Multi-gene phylogeny and morphotaxonomy of Amniculicola lignicola: a novel freshwater fungus from France and its relationships to the Pleosporales

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Ascus types are phylogenetically misleading in Trapeliaceae and Agyriaceae (Ostropomycetidae, Ascomycota).

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Pigment chemistry, taxonomy and phylogeny of the Hypoxyloideae (Xylariaceae).

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Phylogenetic relationships of coprophilous Pleosporales (Dothideomycetes, Ascomycota), and the classification of some bitunicate taxa of unknown position

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Phylogenetic investigations of Sordariaceae based on multiple gene sequences and morphology.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Phylogenetic relationships of Lecanoromycetes (Ascomycota) as revealed by analyses of mtSSU and nLSU rDNA sequence data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Chemotaxonomy of Entonaema, Rhopalostroma and other Xylariaceae

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Marine fungal lineages in the Hypocreomycetidae

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Phylogenetic significance of the pseudoparaphyses in Loculoascomycete taxonomy.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Molecular phylogeny of Leptosphaeria and Phaeosphaeria.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Rapid and accurate large-scale coestimation of sequence alignments and phylogenetic trees

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

The phytopathogenic fungus Alternaria brassicicola: phytotoxin production and phytoalexin elicitation

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Affinities of Phylacia and the daldinoid Xylariaceae, inferred from chemotypes of cultures and ribosomal DNA sequences

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

The polyphyletic nature of Pleosporales: an example from Massariosphaeria based on rDNA and RBP2 gene phylogenies

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

WASABI: an automated sequence processing system for multigene phylogenies.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

The family Pleosporaceae: intergeneric relationships and phylogenetic perspectives based on sequence analyses of partial 28S rDNA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

Phylogeny of the Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816967

The hypocrealean fungi (Ascomycetes, Hypocreales)

28 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/20169024

12 December 2020

Sequence diversity of mating-type genes in Phaeosphaeria avenaria

1 reference

https://pubmed.ncbi.nlm.nih.gov/20169024

12 December 2020

Phylogenetic relationships between members of the crucifer pathogenic Leptosphaeria maculans species complex as shown by mating type (MAT1-2), actin, and beta-tubulin sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/20169024

12 December 2020

Molecular phylogeny of the Pertusariaceae supports secondary chemistry as an important systematic character set in lichen-forming ascomycetes

1 reference

https://pubmed.ncbi.nlm.nih.gov/20169024

12 December 2020

New bottles for old wine: fruit body types, phylogeny, and classification

1 reference

https://pubmed.ncbi.nlm.nih.gov/20169024

12 December 2020

Global migration patterns in the fungal wheat pathogen Phaeosphaeria nodorum

1 reference

https://pubmed.ncbi.nlm.nih.gov/20169024

12 December 2020

Bambusicolous fungi in Japan (3): a new combination, Kalmusia scabrispora

1 reference

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

7 January 2021

Bambusicolous fungi in Japan (6): Katumotoa, a new genus of phaeosphaeriaceous ascomycetes

1 reference

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7 January 2021

Pleospora straminis, P. rubelloides and P. rubicunda: Three fungi causing purple-staining of decaying tissues

1 reference

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7 January 2021

Didymosphaeria igniaria sp.nov., the perfect state of Periconia igniaria

1 reference

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

7 January 2021

Reexamination of some Leptosphaeria and Phaeosphaeria species, Passeriniella obiones and Melanomma radicans

1 reference

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7 January 2021

Lichenopyrenis galligena (Pleomassariaceae), a new genus of gall-forming lichenicolous fungi on Leptochidium

1 reference

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7 January 2021

Molecular evidence for the presence of Ophiosphaerella narmari n. comb., a cause of spring dead spot of Bermuda grass, in North America

1 reference

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7 January 2021

Bimuria novae-zelandiaegen. et sp. nov., a remarkable ascomycete isolated from a New Zealand barley field

1 reference

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7 January 2021

Yield Loss Potential of Phaeosphaeria Leaf Spot of Maize Caused by Phaeosphaeria maydis in the United States

1 reference

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7 January 2021

TNT, a free program for phylogenetic analysis

1 reference

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

7 January 2021

Type studies of Massaria from the Wehmeyer Collection

1 reference

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7 January 2021

Canadian and some extralimital Ophiobolus species

1 reference

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7 January 2021

Ascospore sculpturing and generic concepts in the Testudinaceae (syn. Zopfiaceae)

1 reference

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7 January 2021

Canadian and some extralimital Leptosphaeria species

1 reference

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

7 January 2021

Canadian and some extralimital Nodulosphaeria and Entodesmium species

1 reference

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7 January 2021

Canadian and some extralimital Paraphaeosphaeria species

1 reference

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

7 January 2021

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

1 reference

7 January 2021

Template:Miyake, 1909

1 reference

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

7 January 2021

Evolution of the Fungi

1 reference

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

7 January 2021

A Classification of Loculoascomycetes

1 reference

https://api.crossref.org/works/10.3114%2FSIM.2009.64.04

7 January 2021

Biodiversity of fungi on submerged wood in Hong Kong streams

1 reference

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7 January 2021

Identifiers

DOI

10.3114/SIM.2009.64.04

1 reference

1 reference

1 reference

PubMed publication ID

20169024

1 reference