The RCSB Protein Data Bank: redesigned web site and web services (Q24616175)

14

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Andreas Prlić

7

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Christine Zardecki

13

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Martha Quesada

8

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Wolfgang Bluhm

4

Wolfgang F Bluhm

0 references

John Westbrook

10

John D Westbrook

0 references

Peter W. Rose

Peter W Rose

1

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Jasmine Young

Jasmine Young

11

0 references

Chunxiao Bi

3

Chunxiao Bi

0 references

Dimitris Dimitropoulos

5

Dimitris Dimitropoulos

0 references

David Goodsell

6

David S Goodsell

0 references

Gregory B Quinn

9

Gregory B Quinn

0 references

Benjamin Yukich

12

Benjamin Yukich

0 references

Bojan Beran

2

Creative Commons Attribution-NonCommercial 2.5 Generic

Bojan Beran

0 references

language of work or name

English

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publication date

January 2011

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published in

Nucleic Acids Research

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volume

39

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issue

Database issue

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page(s)

D392-401

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copyright license

start time

14 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Pre-calculated protein structure alignments at the RCSB PDB website

1 reference

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The Pfam protein families database

7 April 2017

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The Transporter Classification Database: recent advances

7 April 2017

1 reference

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BindingDB: a web-accessible database of experimentally determined protein-ligand binding affinities

7 April 2017

1 reference

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Will a biological database be different from a biological journal?

7 April 2017

1 reference

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The RCSB Protein Data Bank: a redesigned query system and relational database based on the mmCIF schema

7 April 2017

1 reference

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Gene ontology: tool for the unification of biology

7 April 2017

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7 April 2017

The Protein Data Bank

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Visualizing proton antenna in a high-resolution green fluorescent protein structure

7 April 2017

1 reference

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The structure of rat liver vault at 3.5 angstrom resolution

7 April 2017

1 reference

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Multicopy crystallographic refinement of a relaxed glutamine synthetase from Mycobacterium tuberculosis highlights flexible loops in the enzymatic mechanism and its regulation

7 April 2017

1 reference

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The kink-turn: a new RNA secondary structure motif

7 April 2017

1 reference

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Crystal structure and mutational analysis of a perlecan-binding fragment of nidogen-1

7 April 2017

1 reference

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Crystal structure of the ribosome at 5.5 A resolution

7 April 2017

1 reference

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The crystal structure of bacteriophage GA and a comparison of bacteriophages belonging to the major groups of Escherichia coli leviviruses

7 April 2017

1 reference

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Inference of macromolecular assemblies from crystalline state

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013649

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

7 April 2017

1 reference

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Announcing the worldwide Protein Data Bank

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013649

The Universal Protein Resource (UniProt) in 2010

7 April 2017

1 reference

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Data growth and its impact on the SCOP database: new developments

7 April 2017

1 reference

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Flexible structure alignment by chaining aligned fragment pairs allowing twists

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013649

Integration of open access literature into the RCSB Protein Data Bank using BioLit

7 April 2017

1 reference

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Will widgets and semantic tagging change computational biology?

27 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013649

BioLit: integrating biological literature with databases

27 September 2017

1 reference

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Structure determination of symmetric homo-oligomers by a complete search of symmetry configuration space, using NMR restraints and van der Waals packing.

27 September 2017

1 reference

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Entactin: structure and function

27 September 2017

1 reference

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PDBe: Protein Data Bank in Europe

27 September 2017

1 reference

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Data Deposition and Annotation at the Worldwide Protein Data Bank

21 January 2018

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The CATH hierarchy revisited-structural divergence in domain superfamilies and the continuity of fold space

21 January 2018

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PQS: a protein quaternary structure file server

21 January 2018

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21 January 2018

Identifiers

DOI

10.1093/NAR/GKQ1021

1 reference

journals/nar/RoseBBBDGPQQWYYZBB11

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 reference

PubMed publication ID

21036868

1 reference