Vienna-PTM web server: a toolkit for MD simulations of protein post-translational modifications (Q24608267)

April 2022 Public Data File from Crossref

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SwissParam: A fast force field generation tool for small organic molecules

7 April 2017

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The Chemistry Development Kit (CDK): an open-source Java library for Chemo- and Bioinformatics

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The atomic structure of human methemalbumin at 1.9 A

7 April 2017

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GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

7 April 2017

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GROMACS: fast, flexible, and free

7 April 2017

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The MAPK signaling cascade

7 April 2017

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A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6

7 April 2017

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Protein Electrostatic Properties Predefining the Level of Surface Hydrophobicity Change upon Phosphorylation

7 April 2017

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Post-translational modification and regulation of actin

27 September 2017

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Regulation of the H4 tail binding and folding landscapes via Lys-16 acetylation.

27 September 2017

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Molecular dynamics simulations reveal specific interactions of post-translational palmitoyl modifications with rhodopsin in membranes.

27 September 2017

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MATCH: an atom-typing toolset for molecular mechanics force fields.

27 September 2017

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Quantitative assessment of protein interaction with methyl-lysine analogues by hybrid computational and experimental approaches

27 September 2017

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Ras, an actor on many stages: posttranslational modifications, localization, and site-specified events.

27 September 2017

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R.E.D. Server: a web service for deriving RESP and ESP charges and building force field libraries for new molecules and molecular fragments

27 September 2017

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Microscopic analysis of protein oxidative damage: effect of carbonylation on structure, dynamics, and aggregability of villin headpiece

27 September 2017

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The R.E.D. tools: advances in RESP and ESP charge derivation and force field library building

27 September 2017

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Conformational averaging in structural biology: issues, challenges and computational solutions

27 September 2017

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Molecular dynamics simulation of phosphorylated KID post-translational modification

27 September 2017

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Cross-regulation of histone modifications

27 September 2017

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Historical review: the field of protein methylation

27 September 2017

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Biomolecular modeling: Goals, problems, perspectives

27 September 2017

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Protein posttranslational modifications: the chemistry of proteome diversifications

27 September 2017

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Functional analysis of the roles of posttranslational modifications at the p53 C terminus in regulating p53 stability and activity

27 September 2017

1 reference

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Role of oxidative carbonylation in protein quality control and senescence

27 September 2017

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Molecular dynamics simulations of biomolecules

27 September 2017

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Revised AMBER parameters for bioorganic phosphates

27 September 2017

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Automation of the CHARMM General Force Field (CGenFF) I: bond perception and atom typing.

30 May 2018

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Automation of the CHARMM General Force Field (CGenFF) II: assignment of bonded parameters and partial atomic charges.

30 May 2018

1 reference

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The effect of point mutations on structure and mechanical properties of collagen-like fibril: A molecular dynamics study

30 May 2018

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An Automated Force Field Topology Builder (ATB) and Repository: Version 1.0

21 January 2018

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An improved GROMOS96 force field for aliphatic hydrocarbons in the condensed phase

21 January 2018

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Definition and testing of the GROMOS force-field versions 54A7 and 54B7

21 January 2018

1 reference

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Force field parameters for the simulation of modified histone tails

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692090

On the Contribution of Linear Correlations to Quasi-harmonic Conformational Entropy in Proteins

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23703210

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKT416

1 reference

journals/nar/MargreitterPZ13

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 reference

PubMed publication ID

23703210

1 reference