Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes (Q24298731)

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0071010

U2-type prespliceosome

1 reference

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0071004

author

Reinhard Georg Lührmann

11

0 references

Henning Urlaub

9

0 references

Cindy L Will

8

object named as

Cindy L Will

0 references

Berthold Kastner

5

object named as

Berthold Kastner

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author name string

Nastaran Behzadnia

1

0 references

Monika M Golas

2

0 references

Klaus Hartmuth

3

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Bjoern Sander

4

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Jochen Deckert

6

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Prakash Dube

7

0 references

Holger Stark

SNEV is an evolutionarily conserved splicing factor whose oligomerization is necessary for spliceosome assembly

10

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language of work or name

English

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publication date

21 March 2007

0 references

published in

The EMBO Journal

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volume

26

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issue

6

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page(s)

1737-48

0 references

cites work

1 reference

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The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo

19 March 2017

1 reference

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A subset of human 35S U5 proteins, including Prp19, function prior to catalytic step 1 of splicing

19 March 2017

1 reference

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Characterization of novel SF3b and 17S U2 snRNP proteins, including a human Prp5p homologue and an SF3b DEAD-box protein

19 March 2017

1 reference

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Large-scale proteomic analysis of the human spliceosome

19 March 2017

1 reference

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Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis

19 March 2017

1 reference

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Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry

19 March 2017

1 reference

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Functional association of U2 snRNP with the ATP-independent spliceosomal complex E

19 March 2017

1 reference

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Purification of splicing factor SF1, a heat-stable protein that functions in the assembly of a presplicing complex

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Arrested yeast splicing complexes indicate stepwise snRNP recruitment during in vivo spliceosome assembly

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

The Prp19p-associated complex in spliceosome activation

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Molecular Architecture of the Multiprotein Splicing Factor SF3b

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

The Clf1p splicing factor promotes spliceosome assembly through N-terminal tetratricopeptide repeat contacts

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Comprehensive proteomic analysis of the human spliceosome

19 March 2017

1 reference

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Functional and physical interactions between components of the Prp19p-associated complex

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

A direct interaction between the carboxyl-terminal region of CDC5L and the WD40 domain of PLRG1 is essential for pre-mRNA splicing

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Yeast ortholog of the Drosophila crooked neck protein promotes spliceosome assembly through stable U4/U6.U5 snRNP addition

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Cef1p is a component of the Prp19p-associated complex and essential for pre-mRNA splicing

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

A new generation of the IMAGIC image processing system

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Yeast precursor mRNA processing protein PRP19 associates with the spliceosome concomitant with or just after dissociation of U4 small nuclear RNA.

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Functional association of essential splicing factor(s) with PRP19 in a protein complex

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Major Conformational Change in the Complex SF3b upon Integration into the Spliceosomal U11/U12 di-snRNP as Revealed by Electron Cryomicroscopy

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Organization of core spliceosomal components U5 snRNA loop I and U4/U6 Di-snRNP within U4/U6.U5 Tri-snRNP as revealed by electron cryomicroscopy

10 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Protein composition and electron microscopy structure of affinity-purified human spliceosomal B complexes isolated under physiological conditions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Advantages of CCD detectors for de novo three-dimensional structure determination in single-particle electron microscopy

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Splicing double: insights from the second spliceosome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Protein composition of human prespliceosomes isolated by a tobramycin affinity-selection method

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

PRCC, the commonest TFE3 fusion partner in papillary renal carcinoma is associated with pre-mRNA splicing factors

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

A new twist on RNA helicases: DExH/D box proteins as RNPases

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

The portal protein of bacteriophage SPP1: a DNA pump with 13-fold symmetry.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Multivariate statistical classification of noisy images (randomly oriented biological macromolecules).

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Three-dimensional reconstruction of single particles from random and nonrandom tilt series

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Three-dimensional structure of the native spliceosome by cryo-electron microscopy

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Functional spliceosomal A complexes can be assembled in vitro in the absence of a penta-snRNP.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Commitment to splice site pairing coincides with A complex formation

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Three-dimensional structure of a pre-catalytic human spliceosomal complex B.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Three-dimensional structure of C complex spliceosomes by electron microscopy.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Small nuclear ribonucleoprotein remodeling during catalytic activation of the spliceosome.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1829389

Corrim-based alignment for improved speed in single-particle image processing

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17332742

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/SJ.EMBOJ.7601631

1 reference

release_4qpjcv6wabbt5jh3ilf5qkrsp4

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/4qpjcv6wabbt5jh3ilf5qkrsp4

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

1 reference

PubMed publication ID

17332742

1 reference