Pages that link to "Q34545688"
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The following pages link to Challenges in protein folding simulations: Timescale, representation, and analysis (Q34545688):
Displaying 50 items.
- Protein stability: computation, sequence statistics, and new experimental methods (Q26779815) (← links)
- Extended Phase-Space Methods for Enhanced Sampling in Molecular Simulations: A Review (Q26782827) (← links)
- Assessing the accuracy of physical models used in protein-folding simulations: quantitative evidence from long molecular dynamics simulations (Q26822885) (← links)
- UV resonance Raman investigations of peptide and protein structure and dynamics (Q26861612) (← links)
- Computational modeling of membrane proteins (Q26995693) (← links)
- GFP's mechanical intermediate states (Q27315229) (← links)
- Systematic validation of protein force fields against experimental data (Q28731830) (← links)
- Formulation of probabilistic models of protein structure in atomic detail using the reference ratio method. (Q30352752) (← links)
- Enhanced Sampling of Coarse-Grained Transmembrane-Peptide Structure Formation from Hydrogen-Bond Replica Exchange. (Q30367786) (← links)
- A three dimensional visualisation approach to protein heavy-atom structure reconstruction (Q30370330) (← links)
- Assessment of the utility of contact-based restraints in accelerating the prediction of protein structure using molecular dynamics simulations. (Q30377837) (← links)
- Necessity of high-resolution for coarse-grained modeling of flexible proteins. (Q30387498) (← links)
- Watching Proteins Wiggle: Mapping Structures with Two-Dimensional Infrared Spectroscopy. (Q30397133) (← links)
- Coarse-Grained Models for Protein-Cell Membrane Interactions (Q30398145) (← links)
- ClustENM: ENM-Based Sampling of Essential Conformational Space at Full Atomic Resolution (Q30826992) (← links)
- A performance/cost evaluation for a GPU-based drug discovery application on volunteer computing (Q33849686) (← links)
- Computational Methodologies for Real-Space Structural Refinement of Large Macromolecular Complexes (Q33926329) (← links)
- Induction of peptide bond dipoles drives cooperative helix formation in the (AAQAA)3 peptide (Q34080081) (← links)
- Protein dynamics via computational microscope (Q34093006) (← links)
- Biophysical and structural considerations for protein sequence evolution (Q34101699) (← links)
- How fast-folding proteins fold (Q34228223) (← links)
- Folding and association of a homotetrameric protein complex in an all-atom Go model (Q34361296) (← links)
- The landscape of the prion protein's structural response to mutation revealed by principal component analysis of multiple NMR ensembles (Q34388437) (← links)
- Random coil to globular thermal response of a protein (H3.1) with three knowledge-based coarse-grained potentials (Q34482239) (← links)
- Balanced Protein-Water Interactions Improve Properties of Disordered Proteins and Non-Specific Protein Association (Q34503099) (← links)
- Variation in structure of a protein (H2AX) with knowledge-based interactions (Q34760527) (← links)
- Smoothing protein energy landscapes by integrating folding models with structure prediction (Q35512701) (← links)
- Directional Dependence of Hydrogen Bonds: a Density-based Energy Decomposition Analysis and Its Implications on Force Field Development (Q35676610) (← links)
- A Large-Scale Assessment of Nucleic Acids Binding Site Prediction Programs (Q35872601) (← links)
- Structural integrity of the ribonuclease H domain in HIV-1 reverse transcriptase. (Q35875958) (← links)
- Sequence, structure, and cooperativity in folding of elementary protein structural motifs (Q35961459) (← links)
- Current status of protein force fields for molecular dynamics simulations (Q36010677) (← links)
- Structural Characterization of λ-Repressor Folding from All-Atom Molecular Dynamics Simulations (Q36039378) (← links)
- Discrete molecular dynamics: an efficient and versatile simulation method for fine protein characterization (Q36120522) (← links)
- Scalable Evaluation of Polarization Energy and Associated Forces in Polarizable Molecular Dynamics: II.Towards Massively Parallel Computations using Smooth Particle Mesh Ewald (Q36206299) (← links)
- Inclusion of many-body effects in the additive CHARMM protein CMAP potential results in enhanced cooperativity of α-helix and β-hairpin formation (Q36207942) (← links)
- Thermally induced protein unfolding probed by isotope-edited IR spectroscopy. (Q36294499) (← links)
- Fibers with integrated mechanochemical switches: minimalistic design principles derived from fibronectin (Q36379193) (← links)
- Protein folding kinetics and thermodynamics from atomistic simulation (Q36397899) (← links)
- Optimization of the additive CHARMM all-atom protein force field targeting improved sampling of the backbone φ, ψ and side-chain χ(1) and χ(2) dihedral angles (Q36546184) (← links)
- A "slow" protein folds quickly in the end. (Q36762739) (← links)
- Accurate structure prediction of peptide-MHC complexes for identifying highly immunogenic antigens (Q36941362) (← links)
- Are Peptides Good Two-State Folders? (Q37122041) (← links)
- Modeling Structural Flexibility of Proteins with Go-Models (Q37167035) (← links)
- Molecular dynamics-based refinement and validation for sub-5 Å cryo-electron microscopy maps (Q37187814) (← links)
- Structure and dynamics of the N-terminal domain of the Cu(I) binding protein CusB. (Q37280077) (← links)
- Crowding effects on the small, fast-folding protein lambda6-85. (Q37327700) (← links)
- Multiscale implementation of infinite-swap replica exchange molecular dynamics (Q37369524) (← links)
- Studying the role of cooperative hydration in stabilizing folded protein states (Q37461059) (← links)
- Structure and response to flow of the glycocalyx layer (Q37533574) (← links)