Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators (Q40815926)

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scientific article published on 9 July 2007

Language	Label	Description	Also known as
English	Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators	scientific article published on 9 July 2007

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scholarly article

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Europe PubMed Central

PMC publication ID

24 September 2017

Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators (English)

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Europe PubMed Central

PMC publication ID

24 September 2017

4

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Europe PubMed Central

PMC publication ID

24 September 2017

author name string

Melissa W Adkins

1

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Europe PubMed Central

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24 September 2017

Stephanie K Williams

2

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24 September 2017

Jeffrey Linger

3

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24 September 2017

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publication date

9 July 2007

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24 September 2017

Molecular and Cellular Biology

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Europe PubMed Central

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24 September 2017

27

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PMC publication ID

24 September 2017

18

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Europe PubMed Central

PMC publication ID

24 September 2017

6372-6382

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Europe PubMed Central

PMC publication ID

24 September 2017

describes a project that uses

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2099613/fullTextXML

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Structural basis for the histone chaperone activity of Asf1

1 reference

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24 September 2017

Activation of Saccharomyces cerevisiae HIS3 results in Gcn4p-dependent, SWI/SNF-dependent mobilization of nucleosomes over the entire gene

1 reference

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24 September 2017

Nucleosome displacement in transcription

1 reference

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24 September 2017

Asf1 mediates histone eviction and deposition during elongation by RNA polymerase II.

1 reference

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24 September 2017

The transcriptional regulatory code of eukaryotic cells--insights from genome-wide analysis of chromatin organization and transcription factor binding

1 reference

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24 September 2017

Dynamic nucleosomes and gene transcription

1 reference

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24 September 2017

Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription

1 reference

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24 September 2017

Domain-wide displacement of histones by activated heat shock factor occurs independently of Swi/Snf and is not correlated with RNA polymerase II density

1 reference

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Genome-wide map of nucleosome acetylation and methylation in yeast

1 reference

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Localized histone acetylation and deacetylation triggered by the homologous recombination pathway of double-strand DNA repair.

1 reference

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Histone dynamics on the interleukin-2 gene in response to T-cell activation

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Promoter occupancy is a major determinant of chromatin remodeling enzyme requirements

1 reference

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24 September 2017

The histone chaperone anti-silencing function 1 is a global regulator of transcription independent of passage through S phase

1 reference

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24 September 2017

Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.

1 reference

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24 September 2017

Evidence for distinct mechanisms facilitating transcript elongation through chromatin in vivo

1 reference

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24 September 2017

Global nucleosome occupancy in yeast

1 reference

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24 September 2017

Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis

1 reference

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24 September 2017

The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo

1 reference

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24 September 2017

Targeting Activity Is Required for SWI/SNF Function In Vivo and Is Accomplished through Two Partially Redundant Activator-Interaction Domains

1 reference

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24 September 2017

Transcription elongation factors repress transcription initiation from cryptic sites.

1 reference

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24 September 2017

Polyphosphate Loss Promotes SNF/SWI- and Gcn5-Dependent Mitotic Induction of PHO5

1 reference

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24 September 2017

Multiple Mechanistically Distinct Functions of SAGA at the PHO5 Promoter

1 reference

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Regulation of chromatin remodeling by inositol polyphosphates

1 reference

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24 September 2017

Histone chaperone ASF1 cooperates with the Brahma chromatin-remodelling machinery

1 reference

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24 September 2017

Transcription activator interactions with multiple SWI/SNF subunits.

1 reference

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Interaction between the Drosophila CAF-1 and ASF1 chromatin assembly factors

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24 September 2017

Increasing the rate of chromatin remodeling and gene activation--a novel role for the histone acetyltransferase Gcn5

1 reference

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24 September 2017

Promoter targeting of chromatin-modifying complexes.

1 reference

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24 September 2017

Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme

1 reference

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24 September 2017

Functional organization of the yeast SAGA complex: distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction.

1 reference

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24 September 2017

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

1 reference

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24 September 2017

Interplay of yeast global transcriptional regulators Ssn6p-Tup1p and Swi-Snf and their effect on chromatin structure

1 reference

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24 September 2017

Crystal structure of the nucleosome core particle at 2.8 A resolution

1 reference

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24 September 2017

The homeodomain protein Pho2 and the basic-helix-loop-helix protein Pho4 bind DNA cooperatively at the yeast PHO5 promoter

1 reference

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24 September 2017

Chromatin remodeling during Saccharomyces cerevisiae ADH2 gene activation

1 reference

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24 September 2017

Regulation of PHO4 nuclear localization by the PHO80-PHO85 cyclin-CDK complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

24 September 2017

The activation domain of a basic helix-loop-helix protein is masked by repressor interaction with domains distinct from that required for transcription regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

24 September 2017

Phosphorylation of the transcription factor PHO4 by a cyclin-CDK complex, PHO80-PHO85.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

24 September 2017

Facilitated binding of TATA-binding protein to nucleosomal DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

24 September 2017

The transactivation domain of Pho4 is required for nucleosome disruption at the PHO5 promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

24 September 2017

Phosphate-regulated inactivation of the kinase PHO80-PHO85 by the CDK inhibitor PHO81.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

24 September 2017

Functional domains of Pho81p, an inhibitor of Pho85p protein kinase, in the transduction pathway of Pi signals in Saccharomyces cerevisiae

1 reference

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24 September 2017

Acid phosphatase polypeptides in Saccharomyces cerevisiae are encoded by a differentially regulated multigene family

1 reference

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24 September 2017

Reciprocal regulation of the tandemly duplicated PHO5/PHO3 gene cluster within the acid phosphatase multigene family of Saccharomyces cerevisiae

1 reference

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24 September 2017

Depletion of histone H4 and nucleosomes activates the PHO5 gene in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

24 September 2017

The two positively acting regulatory proteins PHO2 and PHO4 physically interact with PHO5 upstream activation regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

24 September 2017

Interplay between nucleosomes and transcription factors at the yeast PHO5 promoter

1 reference

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25 September 2017

Recruitment of the NuA4 complex poises the PHO5 promoter for chromatin remodeling and activation

1 reference

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25 September 2017

Chromatin disassembly mediated by the histone chaperone Asf1 is essential for transcriptional activation of the yeast PHO5 and PHO8 genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

17 June 2018

Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

17 June 2018

Active PHO5 chromatin encompasses variable numbers of nucleosomes at individual promoters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

19 August 2018

The histone chaperone Asf1 increases the rate of histone eviction at the yeast PHO5 and PHO8 promoters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

19 August 2018

Genome-scale profiling of histone H3.3 replacement patterns.

1 reference

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19 August 2018

Removal of promoter nucleosomes by disassembly rather than sliding in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

19 August 2018

Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

19 August 2018

Nucleosomes unfold completely at a transcriptionally active promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

19 August 2018

Adr1 and Cat8 synergistically activate the glucose-regulated alcohol dehydrogenase gene ADH2 of the yeast Saccharomyces cerevisiae

1 reference

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19 August 2018

Disruption of reconstituted nucleosomes. The effect of particle concentration, MgCl2 and KCl concentration, the histone tails, and temperature.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

19 August 2018

Evidence for nucleosome depletion at active regulatory regions genome-wide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2099613

1 October 2018

Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II

1 reference

https://pubmed.ncbi.nlm.nih.gov/17620413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.00981-07

1 reference

Europe PubMed Central

PMC publication ID

24 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

24 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

24 September 2017

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