Structural Dynamics of the YidC:Ribosome Complex during Membrane Protein Biogenesis (Q39905150)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

title

Structural Dynamics of the YidC:Ribosome Complex during Membrane Protein Biogenesis (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

1 reference

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

Don C. Lamb

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

1

Alexej Kedrov

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

author name string

Stephan Wickles

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

Eli O van der Sluis

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

Robert Buschauer

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

Otto Berninghausen

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

Roland Beckmann

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

language of work or name

1 reference

1 December 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

volume

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

page(s)

2943-2954

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action

29 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Residues Coevolution Guides the Systematic Identification of Alternative Functional Conformations in Proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Translational arrest by a prokaryotic signal recognition particle is mediated by RNA interactions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

A YidC-like Protein in the Archaeal Plasma Membrane

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Optimizing nanodiscs and bicelles for solution NMR studies of two β-barrel membrane proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Architecture and conformational switch mechanism of the ryanodine receptor

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

The role of the strictly conserved positively charged residue differs among the Gram-positive, Gram-negative, and chloroplast YidC homologs

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Molecular basis for the ribosome functioning as an L-tryptophan sensor

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

A structural model of the active ribosome-bound membrane protein insertase YidC

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Visualization of a polytopic membrane protein during SecY-mediated membrane insertion

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Robust and accurate prediction of residue-residue interactions across protein interfaces using evolutionary information.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Helical membrane protein conformations and their environment

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Electrostatics control actin filament nucleation and elongation kinetics.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Structural model for the protein-translocating element of the twin-arginine transport system

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Emerging methods in protein co-evolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Optimized Phospholipid Bilayer Nanodiscs Facilitate High-Resolution Structure Determination of Membrane Proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Microscale thermophoresis quantifies biomolecular interactions under previously challenging conditions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

The YidC/Oxa1/Alb3 protein family: common principles and distinct features

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

RELION: implementation of a Bayesian approach to cryo-EM structure determination

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Mechanisms of Sec61/SecY-mediated protein translocation across membranes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Towards understanding the Tat translocation mechanism through structural and biophysical studies of the amphipathic region of TatA from Escherichia coli.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Cryo-EM structure of the ribosome–SecYE complex in the membrane environment

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Amphipols, nanodiscs, and fluorinated surfactants: three nonconventional approaches to studying membrane proteins in aqueous solutions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

PHENIX: a comprehensive Python-based system for macromolecular structure solution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Chapter 11 - Reconstitution of membrane proteins in phospholipid bilayer nanodiscs

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

The conserved third transmembrane segment of YidC contacts nascent Escherichia coli inner membrane proteins.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Crystal structure of the major periplasmic domain of the bacterial membrane protein assembly facilitator YidC

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

EMAN2: an extensible image processing suite for electron microscopy

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

FREALIGN: high-resolution refinement of single particle structures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Bacterial Membrane Lipids: Where Do We Stand?

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Accurate determination of local defocus and specimen tilt in electron microscopy

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

YidC, the Escherichia coli homologue of mitochondrial Oxa1p, is a component of the Sec translocase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Structural changes linked to proton translocation by subunit c of the ATP synthase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Electron microscopy and computer image averaging of ice-embedded large ribosomal subunits from Escherichia coli

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Role of the Cytosolic Loop C2 and the C Terminus of YidC in Ribosome Binding and Insertion Activity.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Crystal structure of Escherichia coli YidC, a membrane protein chaperone and insertase.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Structural basis of Sec-independent membrane protein insertion by YidC.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

The C-terminal regions of YidC from Rhodopirellula baltica and Oceanicaulis alexandrii bind to ribosomes and partially substitute for SRP receptor function in Escherichia coli

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Interaction of Streptococcus mutans YidC1 and YidC2 with translating and nontranslating ribosomes.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Elucidating the native architecture of the YidC: ribosome complex.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Competitive binding of the SecA ATPase and ribosomes to the SecYEG translocon.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

F1F0 ATP synthase subunit c is a substrate of the novel YidC pathway for membrane protein biogenesis

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

SIGNATURE: a single-particle selection system for molecular electron microscopy.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

F(1)F(0) ATP synthase subunit c is targeted by the SRP to YidC in the E. coli inner membrane.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Directed self-assembly of monodisperse phospholipid bilayer Nanodiscs with controlled size

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Defining the Regions of Escherichia coli YidC That Contribute to Activity

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Snorkeling of lysine side chains in transmembrane helices: how easy can it get?

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5186731

Substrate-dependent conformational dynamics of the Escherichia coli membrane insertase YidC

20 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27974208

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The mechanosensitive channel protein MscL is targeted by the SRP to the novel YidC membrane insertion pathway of Escherichia coli

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27974208

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

YidC mediates membrane protein insertion in bacteria

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27974208

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELREP.2016.11.059

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974208%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

PubMed publication ID

27974208

1 reference