Shittier is an unconventional code formatting tool

Aggregate results from bioinformatics analyses across many samples into a single report.

The command line interface for access to the Data Delivery System primarily developed by the SciLifeLab Data Centre.

Extensions for Clarity

Data -> DNA -> Data

Converts bam or cram files to fastq format and does quality control.

Menu parser for the restaurants near SciLifeLab in Solna and Uppsala

röddag.nu - shows you when the next swedish holiday is.

A portal for orders (requests, project applications, etc) to a facility from its users.

👛 Inofficiell dokumentation över det API som backar appen ICA.

Python composable command line interface toolkit

Materials for Python testing workshop

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Work-in-progress for the upcoming new and improved Arteria packs.

Application used to populate ProjMan with runfolder data

CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

A service to manage my Daily Song-playlists.

Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.

StackStorm packs to automate sequencing center operations

A fylogenetics pipeline