NGIO is a Python library to streamline OME-Zarr image analysis workflows.

Collection of Fractal task to run Headless ilastik workflows

Image reading, metadata management, and image writing for Microscopy images in Python

Annotated data.

Visualizing feature measurements on label images in napari

Fractal task(s) for registering and fusing OME-Zarr HCS using multiview-stitcher.

A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.

Template for creating a new python repository

Package management made easy

Main tasks for the Fractal analytics platform

Web Image Processing Pipeline (WIPP)

GIve easy, high-level access to ome-zarr fileset

A collection of custom fractal tasks.

iSyntax to raw format converter

Zenodo_get: Downloader for Zenodo records

A napari plugin for zarr backed OME-NGFF images

Framework for image and flow cytometry analysis

Cookiecutter for napari plugins

Demos & examples for Fractal

personal repo bootstrap

Web client for Fractal

A conda-smithy repository for napari-feature-classifier.

Automate adding issues and pull requests to GitHub projects

3D shape analysis of cancer cells using deep learning

A plugin to process Imaging Mass Cytometry data with cellpose and steinbock

Pangea Software's Mighty Mike (Power Pete) for modern systems