I'm a Bioinformatics enthusiast Equipped with a strong background in Bioinformatics and focus on Microbiome – Host Interactions, Metagenomic Analysis, and NGS Analysis. Dedicated researcher have expertise in Linux, Bash Scripting, Machine Learning, and Programming (Python, R).
📄 Publications
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Hafiz Muhammad Adnan Tariq, Nayyab Younas Khan, Haseeb Manzoor & Masood Ur Rehman Kayani, MExploring the impact of type 2 diabetes and glucose-lowering drugs on gut microbiome dynamics. ** Discover Medicine**, 2025. https://doi.org/xxx)
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Muhammad Faheem Raziq 1,2, Nadeem Khan 2, Haseeb Manzoor 2, Hafiz Muhammad Adnan Tariq 2, Mehak Rafiq 3, Shahzad Rasool 3, Masood Ur Rehman Kayani 2,✉, Lisu Huang, Prioritizing gut microbial SNPs linked to immunotherapy outcomes in NSCLC patients by integrative bioinformatics analysis. Journal of Translational Medicine, 2025. https://doi.org/xxx
- T2D and Gut Metagenome-Host Interactions: Identified exclusive CAZyme proteins, and Taxa associated with T2D patients and Employed NGS Techniques, Metagenome Analysis, Linux & Bash Scripting, Gene Family Prediction].
- Environmental Antibiotic Exposure in Zebrafish Gut Metagenomes: Using Machine learning, Metagenomic Analysis, and R to identify the environmental antimicrobial resistance genes and microbial biomarkers.
- Gut Microbial Strains - Non-Small Cell Lung Cancer Treatment: Decoding the Connection: Developed statistical and machine learning models to associate variants and strains with treatment responses.
- NGS data analysis and Multi-Omics
- Microbiome-host interactions
- Metagenomics
- Machine learning and computational modeling
- Work in collaboration at research project "Machine learning identifies microbial biomarkers of environmental antibiotic exposure in zebrafish gut metagenomes" with Shanghai Jiao Tong University, China.
- Developed Developed bioinformatics pipelines using using tools like BWA, BLAST, and Samtools and perform Network analysis.
- Lead Outreach of ISCB-SC Regional Student Council Pakistan.
- Best Director of the Year Award of NUST Bazm-e-Pakistan.
- PhD aspirations: I'm applying to labs that focus on computational modeling, multi-omics, cancer biology, and host-microbiome interactions.
- Seeking collaboration in research projects of Metagenomes and NGS Data Analysis.
- Languages: Python, R, Linux, Shell Scripting
- Tools: Fastp, fastQC, antiSMASH, AMPHORA2, CoverM, DIAMOND, STAR, Bowtie, BWA, BLAST, Samtools, AntiSMASH, Bioconda, and more.
- Data Analysis: Pandas, Scikit-learn, Biopython, SPSS, Minitab, MATLAB, R.
- Version Control: Git, GitHub