This list of sequenced archaeal genomes contains all the archaea known to have publicly available complete genome sequences that have been assembled, annotated and deposited in public databases. Methanococcus jannaschii was the first archaeon whose genome was sequenced, in 1996.[1]
Currently in this list there are 39 genomes belonging to Crenarchaeota species, 105 belonging to the Euryarchaeota, 1 genome belonging to Korarchaeota and to the Nanoarchaeota, 3 belonging to the Thaumarchaeota and 1 genome belonging to an unclassified Archaea, totalling 150 Archaeal genomes.
Crenarchaeota
editAcidilobales
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Acidilobus saccharovorans | 345-15 | 1,496,000 | 1,547 | [2] | CP001742 | 2010 |
Desulforococcales
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Aeropyrum pernix | K1 | 1,669,695 | 2,694 | [3] | NC_000854 (NCBI Reference Sequence) | 1999 |
Desulfurococcus kamchatkensis | 1221n | 1,365,000 | 1,521 | [4] | CP001140 | 2009 |
Hyperthermus butylicus | DSM 5456 | 1,667,000 | 1,669 | [5] | CP000493 | 2007 |
Ignicoccus hospitalis | KIN4/I, DSM 18386 | 1,297,000 | 1,496 | [6] | CP000816 | 2008 |
Ignisphaera aggregans | AQ1.S1, DSM 17230 | 1,875,000 | 2,042 | [7] | CP002098 | 2010 |
Pyrolobus fumarii | 1A, DSM 11204 | 1,843,000 | 2,038 | [8] | CP002838 | 2011 |
Staphylothermus hellenicus | P8, DSM 12710 | 1,580,000 | 1,716 | [9] | CP002051 | 2011 |
Staphylothermus marinus | F1, DSM 3639 | 1,570,000 | 1,659 | [10] | CP000575 | 2011 |
Thermosphaera aggregans | M11TL, DSM 11486 | 1,316,000 | 1,457 | [11] | CP001939 | 2010 |
Sulfolobales
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Acidianus hospitalis | W1 | 2,137,000 | 2,424 | [12] | CP002535 | 2011 |
Metallosphaera cuprina | Ar-4 | 1,840,000 | 2,077 | [13] | CP002656 | 2011 |
Metallosphaera sedula | DSM 5348 | 2,191,000 | 2,347 | [14] | CP000682 | 2008 |
Sulfolobus acidocaldarius | DSM 639 | 2,225,959 | 2,223 | [15] | CP000077 | 2005 |
Sulfolobus islandicus | HVE10/4 | 2,655,000 | [16] | CP002426 | 2011 | |
Sulfolobus islandicus | L.D.8.5 | 2,722,000 | 2,996 | [17] | Chromosome CP001731 Plasmid pLD8501 CP001732 |
2009 |
Sulfolobus islandicus | L.S.2.15 | 2,736,000 | 3,068 | [17] | CP001399 | 2009 |
Sulfolobus islandicus | M.14.25 | 2,608,000 | 2,900 | [17] | CP001400 | 2009 |
Sulfolobus islandicus | M.16.27 | 2,692,000 | 2,956 | [17] | CP001401 | 2009 |
Sulfolobus islandicus | M.16.4 | 2,586,000 | 2,869 | [17] | CP001402 | 2009 |
Sulfolobus islandicus | REY15A | 2,522,000 | [16] | CP002425 | 2011 | |
Sulfolobus islandicus | Y.G.57.14 | 2,702,000 | 3,079 | [17] | CP001403 | 2009 |
Sulfolobus islandicus | Y.N.15.51 | 2,812,000 | 3,318 | [17] | Chromosome CP001404 Plasmid pYN01 CP001405 |
2009 |
Sulfolobus islandicus | LAL14/1 | 2,465,177 | 2,601 | [18] | CP003928 | 2013 |
Sulfolobus solfataricus | P2 | 2,992,245 | 2,995 | [19] | AE006641 | 2001 |
Sulfolobus solfataricus | 98/2 | 2,668,000 | 2,728 | DOE Joint Genome Institute | CP001800 | 2009 |
Sulfolobus tokodaii | 7 | 2,694,765 | 2,826 | [20] | BA000023 | 2001 |
Thermoproteales
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Caldivirga maquilingensis | IC-167 | 2,077,000 | 2,011 | DOE Joint Genome Institute | CP000852 | 2007 |
Pyrobaculum aerophilum | IM2 | 2,222,430 | 2,605 | [21] | AE009441 | 2002 |
Pyrobaculum arsenaticum | PZ6, DSM 13514 | 2,121,000 | 2,410 | DOE Joint Genome Institute | CP000660 | 2007 |
Pyrobaculum calidifontis | JCM 11548 | 2,009,000 | 2,213 | DOE Joint Genome Institute | CP000561 | 2007 |
Pyrobaculum islandicum | DSM 4184 | 1,826,000 | 2,063 | DOE Joint Genome Institute | CP000504 | 2006 |
Pyrobaculum sp. 1860 | Unpublished[22] | CP003098 | 2011 | |||
Thermofilum pendens | Hrk 5 | 1,781,000 | 1,930 | [23] | Chromosome CP000505 Plasmid pTPEN01 CP000506 |
2008 |
Thermoproteus neutrophilus | V24Sta | 1,769,000 | 2,053 | DOE Joint Genome Institute | CP001014 | 2008 |
Thermoproteus tenax | Kra1 | 1,841,000 | 2,100 | [24] | FN869859 | 2011 |
Thermoproteus uzoniensis | 768-20 | 1,936,000 | 2,229 | [25] | CP002590 | 2011 |
Vulcanisaeta distributa | DSM 14429 | 2,374,000 | 2,592 | [26] | CP002100 | 2010 |
Vulcanisaeta moutnovskia | 768-28 | 2,298,000 | 2,393 | [27] | CP002529 | 2011 |
Euryarchaeota
editArchaeoglobi
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Archaeoglobus fulgidus | DSM4304 | 2,178,400 | 2,407 | [28] | AE000782 | 1997 |
Archaeoglobus veneficus | SNP6, DSM 11195 | 1,901,000 | 2,194 | DOE Joint Genome Institute | CP002588 | 2011 |
Archaeoglobus profundus | Av18, DSM 5631 | 1,563,000 | 1,911 | [29] | Chromosome CP001857 Plasmid pArcpr01 CP001858 |
2010 |
Ferroglobus placidus | AEDII12DO, DSM 10642 | 2,196,000 | 2,622 | [30] | CP001899 | 2011 |
Halobacteria
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Halalkalicoccus jeotgali | B3, DSM 18796 | 3,690,000 | 3925 | [31] | Chromosome I CP002062 Plasmid 1 CP002063 |
2010 |
Haloarcula hispanica | CGMCC 1.2049 | 3,484,000 | 3,561 | [32] | Chromosome I CP002921 |
2011 |
Haloarcula marismortui | ATCC 43049 | 3,131,724 | 3,131 | [33] | Chromosome I AY596297 Chromosome II AY596298 |
2004 |
Halobacterium salinarum | R1, DSM 671 | 2,000,000 | 2,801 | [34] | Chromosome NC_010364 Plasmid PHS1 NC_010366 |
2008 |
Halobacterium species | NRC-1 | 2,014,239 | 2,058 | [35] | Chromosome NC_002607 |
2000 |
Halobiforma lacisalsi | AJ5, JCM 12983 | 4,320,000 | 4,682 | [36] | AGFZ00000000 | 2011 |
Haloferax volcanii | DS2 | [37] | Chromosome CP001956 Plasmid pHV1 CP001957 |
2010 | ||
Halogeometricum borinquense | PR3, DSM 11551 | 3,920,000 | 4,059 | [38] | Chromosome CP001690 Plasmid pHBOR01 CP001691 |
2009 |
Halomicrobium mukohataei | arg-2, DSM 12286 | 3,332,000 | 3,475 | [39] | Chromosome CP001688 Plasmid pHmuk01 CP001689 |
2009 |
Halopiger xanaduensis | SH-6 | 3,668,000 | 3,685 | DOE Joint Genome Institute | Chromosome CP002839 Plasmid pHALXA01 CP002840 |
2011 (Chromosome) |
Haloquadratum walsbyi | C23, DSM 16854 | 3,148,000 | [40] | Chromosome FR746099 Plasmid PL6A FR746101 |
2011 | |
Haloquadratum walsbyi | HBSQ001, DSM 16790 | 3,132,000 | 2,914 | [41] | Chromosome AM180088 Plasmid PL47 AM180089 |
2006 |
Halorhabdus tiamatea | SARL4B | 3,840,000 | 4,034 | [42] | AFNT00000000 | 2011 |
Halorhabdus utahensis | AX-2, DSM 12940 | 3116 Kb | 3076 | [43] | CP001687 | 2009 |
Halorubrum lacusprofundi | ATCC 49239 | 4,300,000 | 3,725 | DOE Joint Genome Institute | Chromosome 1 CP001365 |
2009 (Chromosomes 1 and 2) |
Haloterrigena turkmenica | VKM B-1734, DSM 5511 | 5,440,000 | 5,351 | [44] | Chromosome CP001860 Plasmid pHTUR01 CP001861 |
2010 |
Natrialba asiatica | ATCC 700177 | [45] | Survey | 2004 | ||
Natrialba magadii | ATCC 43099 | 3,751,000 | 4,364 | DOE Joint Genome Institute | CP001932 | 2010 |
Natronomonas pharaonis | DSM2160 | 2,595,221 | 2,675 | [46] | Chromosome CR936257 |
2005 |
Methanobacteria
editMethanococci
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Methanocaldococcus fervens | AG86 | 1,485,000 | 1,663 | DOE Joint Genome Institute | Chromosome CP001696 Plasmid pMEFER01 CP001697 |
2009 (Chromosome) |
Methanocaldococcus infernus | ME | 1,328,000 | 1,513 | DOE Joint Genome Institute | CP002009 | 2010 |
Methanocaldococcus jannaschii | DSM 2661 | 1,664,970 | 1,715 | [54] | Chromosome: L77117 |
1996 |
Methanocaldococcus vulcanius | M7, DSM 12094 | 1,746,000 | 1,808 | DOE Joint Genome Institute | Chromosome CP001787 |
2009 |
Methanocaldococcus sp. FS406-22 | 1,760,000 | 1,893 | DOE Joint Genome Institute | Chromosome CP001901 Plasmid pFS01 CP001902 |
2010 (Chromosome) | |
Methanococcus aeolicus | Nankai-3 | 1,569,000 | 1,554 | DOE Joint Genome Institute | CP000743 | 2007 |
Methanococcus maripaludis | C5 | 1,780,000 | 1,896 | DOE Joint Genome Institute | CP000609 | 2007 |
Methanococcus maripaludis | C6 | 1,744,000 | 1,874 | DOE Joint Genome Institute | CP000867 | 2007 |
Methanococcus maripaludis | C7 | 1,772,000 | 1,858 | DOE Joint Genome Institute | CP000745 | 2007 |
Methanococcus maripaludis | S2 | 1,661,137 | 1,722 | [55] | NC_005791 (NCBI Reference Sequence) | 2004 |
Methanococcus maripaludis | X1 | 1,746,000 | 1,892 | [56] | CP002913 | 2011 |
Methanococcus vannielii | SB | 1,720,000 | 1,755 | DOE Joint Genome Institute | CP000742 | 2007 |
Methanococcus voltae | A3 | 1,936,000 | 1,768 | DOE Joint Genome Institute | CP002057 | 2010 |
Methanothermococcus okinawensis | IH1 | 1,662,000 | 1,662 | DOE Joint Genome Institute | Chromosome CP002792 Plasmid pMETOK01 CP002793 |
2011 (Chromosome) |
Methanotorris igneus | Kol5, DSM 5666 | 1,854,000 | 1,843 | DOE Joint Genome Institute | CP002737 | 2011 |
Methanomicrobia
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Candidatus Methanoregula boonei | 6A8 | 2,542,000 | 2,518 | DOE Joint Genome Institute[57] | CP000780 | 2007 |
Methanocella sp. Rice Cluster I (RC-I) | MRE50 | 3,179,916 | 3103 | Genome sequence,[58] then taxonomic placement[59] | AM114193 | 2005 |
Methanocella paludicola | SANAE | 2,957,635 | 3004 | [60] | AP011532 | 2011 |
Methanocella conradii | HZ254 | 1,316,380 | 2512 | [61] | CP003243 | 2012 |
Methanococcoides burtonii | DSM6242 | 2,575,032 | 2,273 | [62] | CP000300 | 2009 |
Methanocorpusculum labreanum | Z | 1,804,000 | 1,830 | [63] | CP000559 | 2009 |
Methanoculleus marisnigri | JR1, DSM 1498 | 2,478,000 | 2,560 | [64] | CP000562 | 2009 |
Methanohalobium evestigatum | Z-7303 | 2,406,232 | 2,254 | DOE Joint Genome Institute[65] | Chromosome: CP002069 Plasmid pMETEV01: CP002070 |
2010 (Chromosome) |
Methanohalophilus mahii | SLP, DSM 5219 | 2,012,000 | 2,095 | [66] | CP001994 | 2010 |
Methanoplanus petrolearius | SEBR 4847, DSM 11571 | 2,843,000 | 2,881 | [67] | CP002117 | 2011 |
Methanosalsum zhilinae | WeN5, DSM 4017 | 2,138,000 | 2,086 | CP002101 | 2010 | |
Methanosaeta concilii | GP-6 | 3,008,000 | [68] | CP002565 | 2010 | |
Methanosaeta harundinacea | 6Ac | 2,559,000 | [22] | CP003117 | 2011 | |
Methanosaeta thermophila | PT | 1,879,000 | 1,785 | DOE Joint Genome Institute | CP000477 | 2006 |
Methanosarcina acetivorans | C2A | 5,751,492 | 4,540 | [69] | AE010299 | 2002 |
Methanosarcina barkeri | Fusaro, DSM 804 | 4,837,408 | 3,607 | [70] | Chromosome CP000099 Plasmid 1 CP000098 |
2006 (Chromosome) |
Methanosarcina mazei | Go1 | 4,096,345 | 3,371 | [71] | AE008384 | 2002 |
Methanosphaerula palustris | E1-9c, DSM 19958 | 2,922,000 | 2,859 | DOE Joint Genome Institute | CP001338 | 2008 |
Methanospirillum hungatei | JF-1 | 3,544,738 | 3,139 | DOE Joint Genome Institute | CP000254 | 2006 |
Methanopyri
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Methanopyrus kandleri | AV19 | 1,694,969 | 1,691 | [72] | AE009439 | 2002 |
Thermococci
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Pyrococcus abyssi | GE5 | 1,765,118 | 1,784 | [73] | NC_000868 (NCBI Reference Sequence) | 2000 |
Pyrococcus furiosus | DSM 3638 | 1,908,256 | 2,065 | [74] | AE009950 | 1999 |
Pyrococcus horikoshii | OT3 | 1,738,505 | 2,061 | [75] | NC_000961 (NCBI Reference Sequence) | 1998 |
Pyrococcus sp. NA2 | 1,861,000 | 1,984 | [22] | CP002670 | 2011 | |
Pyrococcus yayanosii | CH1 | 1,716,000 | 1,952 | [76] | CP002779 | 2011 |
Thermococcus barophilus | MP, DSM 11836 | 2,010,000 | 2,196 | [77] | CP002372 | 2011 |
Thermococcus gammatolerans | EJ3 | 2,045,000 | 2,206 | [78] | CP001398 | 2009 |
Thermococcus kodakaraensis | KOD1 | 2,088,737 | 2,306 | [79] | AP006878 | 2005 |
Thermococcus onnurineus | NA1 | 1,847,000 | 2,027 | [80] | NC_011529 (NCBI Reference Sequence) | 2008 |
Thermococcus sibiricus | MM 739 | 1,845,000 | 2,085 | [81] | CP001463 | 2009 |
Thermococcus sp. 4557 | 2,011,000 | 2,181 | [82] | CP002920 | 2011 | |
Thermococcus sp. AM4 | 2,086,000 | 2,279 | [83] | CP002952 | 2011 |
Thermoplasmata
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Ferroplasma acidarmanus | Fer1 | 1,865,000 | 1,742 | [84] | AABC00000000 | 2007 |
Picrophilus torridus | DSM 9790 | 1,545,895 | 1,535 | [85] | AE017261 | 2004 |
Thermoplasma acidophilum | DSM 1728 | 1,564,906 | 1,478 | [86] | NC_002578 (NCBI Reference Sequence) | 2000 |
Thermoplasma volcanium | GSS1 | 1,584,804 | 1,526 | [87] | NC_002689 (NCBI Reference Sequence) | 2000 |
Unclassified Euryarchaeota
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Aciduliprofundum boonei | T469 | 1,486,000 | 1,587 | DOE Joint Genome Institute | CP001941 | 2010 |
Korarchaeota
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Candidatus Korarchaeum cryptofilum | OPF8 | 1,590,000 | 1,661 | [88] | CP000968 | 2008 |
Nanoarchaeota
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Nanoarchaeum equitans | Kin4-M | 490,885 | 536 | [89] | AE017199 | 2003 |
Thaumarchaeota
editCenarchaeales
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Cenarchaeum symbiosum | A | 2,045,000 | 2,066 | [90] | DP000238 | 2006 |
Nitrosopumilales
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
Candidatus Nitrosoarchaeum limnia | SFB1 | 1,769,000 | 2,171 | [91] | AEGP00000000 | 2011 |
Nitrosopumilus maritimus | SCM1 | 1,645,000 | 1,842 | [92] | CP000866 | 2010 |
Unclassified Archaea
editSpecies | Strain | Base Pairs | Genes | Reference | GenBank identifier | Publication year |
---|---|---|---|---|---|---|
halophilic archaeon sp. DL31 | Unpublished[22] | CP002988 | 2011 |
See also
editReferences
edit- ^ Bult CJ, White O, Olsen GJ, Zhou L, Fleischmann RD, Sutton GG, et al. (August 1996). "Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii". Science. 273 (5278): 1058–73. Bibcode:1996Sci...273.1058B. doi:10.1126/science.273.5278.1058. PMID 8688087. S2CID 41481616.
- ^ Mardanov AV, Svetlitchnyi VA, Beletsky AV, Prokofeva MI, Bonch-Osmolovskaya EA, Ravin NV, Skryabin KG (August 2010). "The genome sequence of the crenarchaeon Acidilobus saccharovorans supports a new order, Acidilobales, and suggests an important ecological role in terrestrial acidic hot springs". Applied and Environmental Microbiology. 76 (16): 5652–7. Bibcode:2010ApEnM..76.5652M. doi:10.1128/AEM.00599-10. PMC 2918975. PMID 20581186.
- ^ Kawarabayasi Y, Hino Y, Horikawa H, Yamazaki S, Haikawa Y, Jin-no K, et al. (April 1999). "Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1". DNA Research. 6 (2): 83–101, 145–52. doi:10.1093/dnares/6.2.83. PMID 10382966.
- ^ Ravin NV, Mardanov AV, Beletsky AV, Kublanov IV, Kolganova TV, Lebedinsky AV, et al. (April 2009). "Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis". Journal of Bacteriology. 191 (7): 2371–9. doi:10.1128/JB.01525-08. PMC 2655497. PMID 19114480.
- ^ Brügger K, Chen L, Stark M, Zibat A, Redder P, Ruepp A, et al. (May 2007). "The genome of Hyperthermus butylicus: a sulfur-reducing, peptide fermenting, neutrophilic Crenarchaeote growing up to 108 degrees C". Archaea. 2 (2): 127–35. doi:10.1155/2007/745987. PMC 2686385. PMID 17350933.
- ^ Podar M, Anderson I, Makarova KS, Elkins JG, Ivanova N, Wall MA, et al. (2008). "A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans". Genome Biology. 9 (11): R158. doi:10.1186/gb-2008-9-11-r158. PMC 2614490. PMID 19000309.
- ^ Göker M, Held B, Lapidus A, Nolan M, Spring S, Yasawong M, et al. (August 2010). "Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1)". Standards in Genomic Sciences. 3 (1): 66–75. doi:10.4056/sigs.1072907. PMC 3035270. PMID 21304693.
- ^ Anderson I, Göker M, Nolan M, Lucas S, Hammon N, Deshpande S, et al. (July 2011). "Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A)". Standards in Genomic Sciences. 4 (3): 381–92. doi:10.4056/sigs.2014648. PMC 3156397. PMID 21886865.
- ^ Anderson I, Wirth R, Lucas S, Copeland A, Lapidus A, Cheng JF, et al. (October 2011). "Complete genome sequence of Staphylothermus hellenicus P8". Standards in Genomic Sciences. 5 (1): 12–20. doi:10.4056/sigs.2054696. PMC 3236042. PMID 22180806.
- ^ Anderson IJ, Dharmarajan L, Rodriguez J, Hooper S, Porat I, Ulrich LE, et al. (April 2009). "The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota". BMC Genomics. 10: 145. doi:10.1186/1471-2164-10-145. PMC 2678158. PMID 19341479.
- ^ Spring S, Rachel R, Lapidus A, Davenport K, Tice H, Copeland A, et al. (June 2010). "Complete genome sequence of Thermosphaera aggregans type strain (M11TL)". Standards in Genomic Sciences. 2 (3): 245–59. doi:10.4056/sigs.821804. PMC 3035292. PMID 21304709.
- ^ You XY, Liu C, Wang SY, Jiang CY, Shah SA, Prangishvili D, et al. (July 2011). "Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles". Extremophiles. 15 (4): 487–97. doi:10.1007/s00792-011-0379-y. PMC 3119797. PMID 21607549.
- ^ Liu LJ, You XY, Zheng H, Wang S, Jiang CY, Liu SJ (July 2011). "Complete genome sequence of Metallosphaera cuprina, a metal sulfide-oxidizing archaeon from a hot spring". Journal of Bacteriology. 193 (13): 3387–8. doi:10.1128/JB.05038-11. PMC 3133273. PMID 21551305.
- ^ Auernik KS, Maezato Y, Blum PH, Kelly RM (February 2008). "The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism". Applied and Environmental Microbiology. 74 (3): 682–92. Bibcode:2008ApEnM..74..682A. doi:10.1128/AEM.02019-07. PMC 2227735. PMID 18083856.
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- ^ Kawarabayasi Y, Hino Y, Horikawa H, Jin-no K, Takahashi M, Sekine M, et al. (August 2001). "Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7". DNA Research. 8 (4): 123–40. doi:10.1093/dnares/8.4.123. PMID 11572479.
- ^ Fitz-Gibbon ST, Ladner H, Kim UJ, Stetter KO, Simon MI, Miller JH (January 2002). "Genome sequence of the hyperthermophilic crenarchaeon Pyrobaculum aerophilum". Proceedings of the National Academy of Sciences of the United States of America. 99 (2): 984–9. Bibcode:2002PNAS...99..984F. doi:10.1073/pnas.241636498. PMC 117417. PMID 11792869.
- ^ a b c d "GOLD".
- ^ Anderson I, Rodriguez J, Susanti D, Porat I, Reich C, Ulrich LE, et al. (April 2008). "Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction". Journal of Bacteriology. 190 (8): 2957–65. doi:10.1128/JB.01949-07. PMC 2293246. PMID 18263724.
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External links
edit- GOLD:Genomes OnLine Database v 2.0
- SUPERFAMILY comparative genomics database Includes genomes of completely sequenced archaea, and sophisticated datamining plus visualisation tools for analysis