To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("plrs")
In most cases, you don't need to download the package archive at all.
plrs
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Piecewise Linear Regression Splines (PLRS) for the association between DNA copy number and gene expression
Bioconductor version: Release (3.5)
The present package implements a flexible framework for modeling the relationship between DNA copy number and gene expression data using Piecewise Linear Regression Splines (PLRS).
Author: Gwenael G.R. Leday
Maintainer: Gwenael G.R. Leday to <gleday at few.vu.nl>
Citation (from within R,
enter citation("plrs")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("plrs")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("plrs")
| R Script | plrs | |
| Reference Manual |
Details
| biocViews | Regression, Software |
| Version | 1.16.0 |
| In Bioconductor since | BioC 2.12 (R-3.0) (4.5 years) |
| License | GPL (>=2.0) |
| Depends | R (>= 2.10), Biobase |
| Imports | BiocGenerics, CGHbase, graphics, grDevices, ic.infer, marray, methods, quadprog, Rcsdp, stats, stats4, utils |
| LinkingTo | |
| Suggests | mvtnorm, methods |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | plrs_1.16.0.tar.gz |
| Windows Binary | plrs_1.16.0.zip |
| Mac OS X 10.11 (El Capitan) | plrs_1.16.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/plrs |
| Package Short Url | http://bioconductor.org/packages/plrs/ |
| Package Downloads Report | Download Stats |
Documentation »
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