To encode custom python objects as BSON with Pymongo, you have to write a SONManipulator. From the docs:
SONManipulator instances allow you to specify transformations to be applied automatically by PyMongo.
from pymongo.son_manipulator import SONManipulator class Transform(SONManipulator): def transform_incoming(self, son, collection): for (key, value) in son.items(): if isinstance(value, Custom): son[key] = encode_custom(value) elif isinstance(value, dict): # Make sure we recurse into sub-docs son[key] = self.transform_incoming(value, collection) return son def transform_outgoing(self, son, collection): for (key, value) in son.items(): if isinstance(value, dict): if "_type" in value and value["_type"] == "custom": son[key] = decode_custom(value) else: # Again, make sure to recurse into sub-docs son[key] = self.transform_outgoing(value, collection) return son
then add it to your pymongo database object −
db.add_son_manipulator(Transform())
Make a note that you don't have to add the _type field if you want to silently cast a numpy array to a python array.