PSORTdb: a protein subcellular localization database for bacteria (Q24558590)

1 November 2023

Sébastien Rey

1

Sébastien

Rey

1 reference

1 November 2023

Michael Acab

2

Michael

Acab

1 reference

1 November 2023

Matthew R Laird

4

Matthew R

Laird

1 reference

1 November 2023

Katalin deFays

5

Katalin

deFays

1 reference

1 November 2023

Christophe Lambert

6

Christophe

Lambert

1 reference

1 November 2023

Fiona S L Brinkman

7

Fiona S L

Brinkman

1 reference

Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions

1 November 2023

language of work or name

English

0 references

publication date

1 January 2005

0 references

published in

Nucleic Acids Research

0 references

volume

33

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issue

Database issue

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page(s)

D164-8

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

A Hidden Markov Model method, capable of predicting and discriminating beta-barrel outer membrane proteins

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

UniProt: the Universal Protein knowledgebase

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Gene ontology: tool for the unification of biology

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Predicting subcellular localization of proteins using machine-learned classifiers

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

DBSubLoc: database of protein subcellular localization

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Genes to genetic immunization: identification of bacterial vaccine candidates

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Sequence conserved for subcellular localization

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Bacterial bioinformatics: pathogenesis and the genome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Database resources of the National Center for Biotechnology Information.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Predicting subcellular localization of proteins using machine-learned classifiers

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Inferring sub-cellular localization through automated lexical analysis

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

Support vector machine approach for protein subcellular localization prediction

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539981

28 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/15608169

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKI027

1 reference

DBLP publication ID

journals/nar/ReyAGLFLB05

1 reference

DBLP Dataset 2021-01-02

release_ibn36mmr5vak7kubv7gaehbqcu

28 January 2021

Fatcat ID

0 references

1 reference

1 reference

1 reference