E88, a new cyclic-di-GMP class I riboswitch aptamer from Clostridium tetani, has a similar fold to the prototypical class I riboswitch, Vc2, but differentially binds to c-di-GMP analogs. (Q38309712)

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scientific article published on 16 January 2014

Language	Label	Description	Also known as
English	E88, a new cyclic-di-GMP class I riboswitch aptamer from Clostridium tetani, has a similar fold to the prototypical class I riboswitch, Vc2, but differentially binds to c-di-GMP analogs.	scientific article published on 16 January 2014

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24430255%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

E88, a new cyclic-di-GMP class I riboswitch aptamer from Clostridium tetani, has a similar fold to the prototypical class I riboswitch, Vc2, but differentially binds to c-di-GMP analogs (English)

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24430255%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Clostridium tetani

object named as

Clostridium tetani

1 reference

based on heuristic

inferred from title

5

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5 March 2020

author name string

Yiling Luo

1

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5 March 2020

Bin Chen

2

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5 March 2020

Jie Zhou

3

1 reference

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5 March 2020

Herman O Sintim

4

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5 March 2020

publication date

16 January 2014

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5 March 2020

Molecular BioSystems

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5 March 2020

10

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5 March 2020

3

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5 March 2020

384-390

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5 March 2020

Nucleotide, c-di-GMP, c-di-AMP, cGMP, cAMP, (p)ppGpp signaling in bacteria and implications in pathogenesis.

1 reference

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The orphan histidine protein kinase SgmT is a c-di-GMP receptor and regulates composition of the extracellular matrix together with the orphan DNA binding response regulator DigR in Myxococcus xanthus

1 reference

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21 January 2018

Cyclic di-GMP activation of polynucleotide phosphorylase signal-dependent RNA processing.

1 reference

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21 January 2018

Indirect modulation of the intracellular c-Di-GMP level in Shewanella oneidensis MR-1 by MxdA.

1 reference

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21 January 2018

Cyclic di-GMP allosterically inhibits the CRP-like protein (Clp) of Xanthomonas axonopodis pv. citri

1 reference

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21 January 2018

Principles of c-di-GMP signalling in bacteria

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21 January 2018

Second messenger-mediated spatiotemporal control of protein degradation regulates bacterial cell cycle progression

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Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor

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21 January 2018

A cyclic-di-GMP receptor required for bacterial exopolysaccharide production

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Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae

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21 January 2018

Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP

1 reference

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21 January 2018

LapD is a bis-(3',5')-cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1.

1 reference

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21 January 2018

PilZ domain proteins bind cyclic diguanylate and regulate diverse processes in Vibrio cholerae

1 reference

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21 January 2018

The structural basis of cyclic diguanylate signal transduction by PilZ domains

1 reference

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21 January 2018

PilZ domain is part of the bacterial c-di-GMP binding protein

1 reference

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21 January 2018

An allosteric self-splicing ribozyme triggered by a bacterial second messenger

1 reference

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21 January 2018

Riboswitches in eubacteria sense the second messenger cyclic di-GMP

1 reference

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21 January 2018

Differential binding of 2'-biotinylated analogs of c-di-GMP with c-di-GMP riboswitches and binding proteins.

1 reference

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21 January 2018

Structural basis of ligand binding by a c-di-GMP riboswitch

1 reference

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21 January 2018

Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch

1 reference

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21 January 2018

Allosteric tertiary interactions preorganize the c-di-GMP riboswitch and accelerate ligand binding

1 reference

https://api.crossref.org/works/10.1039%2FC3MB70467J

21 January 2018

Selective binding of 2'-F-c-di-GMP to Ct-E88 and Cb-E43, new class I riboswitches from Clostridium tetani and Clostridium botulinum respectively.

1 reference

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21 January 2018

Clustal W and Clustal X version 2.0

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21 January 2018

ESPript: analysis of multiple sequence alignments in PostScript

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21 January 2018

Multiple conformations of SAM-II riboswitch detected with SAXS and NMR spectroscopy.

1 reference

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21 January 2018

Structure of a self-splicing group II intron catalytic effector domain 5: parallels with spliceosomal U6 RNA

1 reference

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21 January 2018

Endo-S-c-di-GMP analogues-polymorphism and binding studies with class I riboswitch.

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Mfold web server for nucleic acid folding and hybridization prediction

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Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing

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Identifiers

10.1039/C3MB70467J

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24430255%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24430255%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

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