Introduction To Organic Chemistry
Introduction To Organic Chemistry
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10
Exercise(1)
i) The energy of an electron in the first Bohr orbit of H atom is
-13.6 eV. The possible energy value(s) of the excited state(s) for
electrons in Bohr orbits of hydrogen is (are) :
a) -3.4 eV b) -4.2 eV c) -6.8 eV d) +6.8 eV
ii) With increase in principal quantum number, n, the energy
difference between adjacent energy levels in Hydrogen atom:
a) Increases b) Decreases c) Remains constant
d) Decreases for lower values of n and increases for higher
values of n.
iii) If the electron of a hydrogen atom is present in the first orbit,
the total energy of the electron is?
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Atomic orbital, What is it???
An orbital is a three-dimensional region around the nucleus
where there is a high probability of finding an electron.
This can make sense of this by imagining that the more carefully
one tries to measure position, the more disruption there is to the
system, resulting in changes in momentum. 12
Cont’d
13
Cont’d
15
Further illustration
16
Cont’d
Based on the above nodal lobes, there are three degenerate
p atomic orbitals.
s Orbitals (l=0)
p Orbitals (l=1)
d Orbitals (l=2)
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Shapes of sub shell orbitals.
The s subshell electron density distribution is spherical and the
p subshell has a dumbbell shape.
The d and f orbitals are more complex.
These shapes represent the three-dimensional regions within
which the electron is likely to be found.
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Question (1)
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Cont’d…
a. What is the maximum number of electrons contained in an
orbital of type (x)? of type (y)? of type (z)?
b. How many orbitals of type (x) are found in a shell with n = 2?
How many of type (y)? How many of type (z)?
c. Write a set of quantum numbers for an electron in an orbital of
type (x) in a shell with n = 4. of an orbital of type (y) in a shell
with n = 2. of an orbital of type (z) in a shell with n = 3.
d. What is the smallest possible n value for an orbital of type (x)?
of type (y)? of type (z)?
e. What are the possible l and ml values for an orbital of type (x)?
of type (y)? of type (z)?
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The Nature of Chemical Bonds
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Exercise
i) How, do elements makes chemical bonding near
the middle and right hand side of the periodic
table form bonds?
ii) What was/is the fundamental concept of electron-
dot structures in the sense of covalent bond?
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Hybridization of Atomic Orbitals
The phenomenon of mixing up of atomic orbitals of similar
energies and formation of equivalent number of entirely new
orbitals of identical shape and energy.
AOs on a single atom mix to form new, hybrid orbitals.
Eg. hybrid orbitals have characteristics of both s and
p orbitals,
It provides a means of explaining observed bond angles in
organic molecules.
It is considered to an important evolutionary force since it may
lead to an increase of the intraspecific genetic diversity of the
participating populations; 25
Cont’d
Thus, it is the creation of new species, species extinction
through genetic assimilation and the generation of highly
invasive genotypes.
Important points for hybridization
The number of hybrid orbitals generated is equal to
the number of pure atomic orbitals that participate in
hybridization process.
Hybridization concept is not applicable to isolated atoms.
It is used to explain the bonding scheme in a molecule.
Covalent bonds is polyatomic molecules are formed by the
overlap of hybrid orbitals or of hybrid orbitals with unhybridized
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Types of Hybridization
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In addition;
Since three p orbitals are mixed with one s-orbital, we call the
hybrid orbitals sp3 meaning that each of them has one-fourth s-
character and three fourth p-character.
Each bond in CH4 is formed by overlap of an sp3 hybrid orbital
of carbon with a 1s orbital of hydrogen. These four bonds point
to the corners of a tetrahedron
32
Cont’d
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Additional Illustration
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Question (4)
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sp3d-hybridization
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Question (6)
39
Cont’d…,
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Factors influencing electron availability
Inductive Effect;
Resonance /Mesomeric
Effect;
Steric Effect;
Electromeric Effect;
Hyperconjugative Effect;
Tautomerism;
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Dipole moment; what ?
For instance;
42
Cont’d…
43
How does dipole moment depend on
electronegativity?
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Inductive effect
47
Question(1)
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ii) Stability of free radicals
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iv) Acidity and basicity Strength
NH3,C6H5NH2.
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v) Reactivity of carbonyl groups!
54
Cont’d…
Furthermore, the withdrawal effect or releasing effect of electrons attributed
to a particular substituent through the delocalization of π or pi-electrons.
This can be seen by drawing various canonical structures is also a
resonance effect or mesomeric effect.
For instance;
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Comparison
56
Cont’d…
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Basic Rules of Resonance
1) Individual resonance forms are imaginary, not real
2) Resonance forms differ only in the placement of their or non-
bonding electrons.
Neither the position nor the hybridization of any atom changes
from one resonance form to another.
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Other examples;…
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Resonance;…
The larger tert-butyl groups twist the structure and prevent the
double bonds from lying in the same plane.
All cannonical forms must have the same number of unpaired
electrons
61
Cont’d…
Charge separation has less contribution;
62
Cont’d;…
a resonance form is like any other structure. The octet rule still
applies.
Then, arrange based on the acidity strength and explain your reason?
and
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Reactions Intermediates
In Organic chemistry, a reactive intermediate or an intermediate is:
a short-lived,
high energy,
highly reactive molecule; that results from homolytic and Heterolytic
bond fission.
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Carbocation
An organic species which has a carbon atom bearing only six electrons in its
outermost shell and has a positive charge.
The positively charged carbon of the carbocation is sp2 hybridized.
The unhybridized p-orbital remains vacant.
They are highly reactive and act as reaction intermediate.
They are also carbonium ion.
It is formed an intermediate species, as a result of the loss of two valence
electrons, normally shared electrons, from a carbon atom that already has
four bonds.
For instance:
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Carbocation Stability
The stability order of carbocations bearing only alkyl groups is
70
Cont’d…
State which carbocation in each pair below is more stable, or if they are
expected to be approximately equal. Explain your reasoning.
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Carbanions
Hypothetical reaction C H + B C + B H
Geometry
C C
sp3 hybridized
hybridization of C is sp2
Pyramidal
Planar
can conjugate
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For instance
Compound pKa
CH4 43
CH6 37
stability of carbanioin and the acicity
Ph3C-H 33 of the molecule is increased
HC CH 25
O
20
C
CH3
N C CH2 C N 12
CH2(NO2)2 4
Generation
1) a group attached to carbon cleaves without its electrons
R H R + H
H Li
e.g. + CH2CH2CH2CH2 Li
(n - BuLi )
phenyllithium 74
Cont’d…
2) Decarboxylation O
-CO2
R C O R
75
Cont’d…
H O O H O H
O -CO2
e.g. N C C O N C N C
O O
H H
O H
stablized by resonance
3) A negative ion adds to a C=C or C
+ Y C C
Y
Stability of Carbanion
H H
H 76
H
Reaction of carbanions
a) Nucleophilic addition
O H2O
Nu M + C Nu C OM Nu C OH
tetrahedral intermediate
b) Grignard reaction
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c) Aldol condensation
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ii) Acid catalyzed
Cont’d…
O O CH3
e.g. 2 H3C C CH3 HCl H3C C CH C CH3 + H2 O
4-methyl-3-penten-2-one
Mechanism
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d) The Knovennagel condensation
Mechanism
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Therefore;
a)
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Mixed Claisen condensations
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Mixed Claisen condensations cont’d…
e.g
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The Dieckmann Cyclization:
It can be carried out with diester and the reaction works best on
1, 6-diesters and 1, 7-diesters.
Examples:
Possible reaction mechanism:
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Possible Mechanism
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Exercise (3)
1)
2)
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Mechanism
O O O
OH CH C
H3C C CH2 H H3C C CH2 H2C CH3
O
H3C C CH2 + H 2O
O O O
H H O O
CH3 C CH2-CH2 CH C CH3 H3 C C CH2 CH2 CH2 C CH3 + OH
C6H5
O C6H5 O
O O O CH
OH CH CH
C6H5 CH CH C C6H5 CH
2)
C O
C O C6H5
C6H5
O H3O+
C6H5
O
enolate anion CH
CH2
C O
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C6H5
Cont’d…
H3O+
CO2Et Na OEt 1) Na OEt heat
2) O O O + CO2 + EtOH
CO2Et 2) C6H5CH2Br
EtO2C CH2C6H5 CH2C6H5
CO2Et
O O
1) OH- O
1) H3C C CH3 H3C C CH2 CH2 CH2 C CH3
O
2) H2C CH C CH3
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Mechanism
O O O
OH CH C
H3C C CH2 H H3C C CH2 H2C CH3
O
H3C C CH2 + H 2O
O O O
H H O O
CH3 C CH2-CH2 CH C CH3 H3 C C CH2 CH2 CH2 C CH3 + OH
C6H5
O C6H5 O
O O O CH
OH CH CH
C6H5 CH CH C C6H5 CH
2)
C O
C O C6H5
C6H5
O H3O+
C6H5
O
enolate anion CH
CH2
C O
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C6H5
Free Radicals
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Exercise (1)
1) State which carbon radical (free radical) in each pair below is more stable or
if they are expected to have comparable stability. Explain your reasoning.
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Free Radicals, Cont’d
It is unstable compound;
obtained by hemolytic processes
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Formation of free radicals
i) Thermolysis
ii) For bonds require energy < 40 Kcal/mol (~165 KJ/mol
For instance
94
Cont’d…
ii) Photolysis
•usually visible light and UV light are used
E h UV 400 nm = ~ 300 KJ / mol
c UV 300 nm = ~ 400 KJ / mol
h UV 200 nm = ~ 600 KJ / mol
95
Note that….
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B)Hyperconjugation
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For instance;
Radical Reactions
Addition of HBr:- the most important reactions of radicals
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Carbenes
100
Generation
101
Photolysis of a ketene
H H
e.g. C N N hv or C the deriving force is the formation
+ N N
H pyrolysis H of stable N2 molecule
diazomethane
Reactions
102
For instance,
103
Cont’d…
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2) Insertion
Mechanism
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