RESEARCH COLLOQUIUM

DATA PROCESSING IN COVID 19 DATASET

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 CONTENTS

01 DPRG

02 COVID -19 Dataset

03 COVID -19 Tools

04 Discussion
 DATA PROCESSING RESEARCH GROUP

OBJECTIVE
ABOUT
To provide details which helps in the research as
− Initiated in November 2010 as Image Processing Research
well as information sharing for researchers
Group later renamed as Data processing research group with
including image as one of its attributes in 2015.
− Constituted by a community of engineers and researchers TREE
who share an interest to join in the evolution of data/image Founder Members
processing research domains. Editors
− An open online community and any interested individual Distinguished Members
can join the group.
Associate Members
− More than 200 members actively contributing to the
research
Understanding the COVID-19 Pandemic as a Big Data Analytics Issue

Big data analytics techniques are well-suited for tracking and controlling the spread of COVID-19 around the world.

The rapid, global spread of COVID-19 has brought advanced big data analytics tools front and center, with entities from all sectors
of the healthcare industry seeking to monitor and reduce the impact of this virus.

Researchers and developers are increasingly using artificial intelligence, machine learning, and natural language processing to
track and contain coronavirus, as well as gain a more comprehensive understanding of the disease.

Between recognizing signs and symptoms, tracking the virus, and monitoring the availability of hospital resources, researchers
are dealing with enormous amounts of information – too much for humans to comprehend and analyze on their own. It’s a
situation
that is seemingly tailor-made for advanced analytics technologies

Amazon Web Services, Google Cloud have recently offered researchers free access to open datasets and analytics tools to
help them develop COVID-19 solutions faster.
DATASET

KAGGLE OPEN RESEARCH

NOVEL CORONA VIRUS 2019 COVID-19 OPEN RESEARCH
DATASET DATASET

JOHNS HOPKINS NEXT STRAIN WHO

CENTER FOR SYSTEMS COVID-19 GENOMICS
SCIENCE AND ENGINEERING DATABASE COVID-19 CASES AND DEATHS
EU OPEN DATA PORTAL

https://data.europa.eu/euodp/en/data/dataset/covid-19-coronavirus-data

COVID-19 cases worldwide CSV, XLSX, JSON, XML

Accrual Periodicity : Daily

Temporal Coverage From 31 December 2019

Publisher European Centre for Disease Prevention and Control

Geographical Coverage: Norway, Poland, Portugal, Romania, Latvia, North Macedonia,

Malta, Netherlands, Russia, Slovakia, Belgium, Austria, China, Bulgaria, Czechia, Cyprus,
Denmark, Germany, Estonia, Spain, France, Finland, Greece, United Kingdom, Hungary,
Croatia, Italy, Ireland, Luxembourg, Lithuania, Sweden, Slovenia
KAGGLE - NOVEL CORONA VIRUS 2019 DATASET

https://www.kaggle.com/sudalairajkumar/novel-corona-virus-2019-dataset

Day level information on covid-19 affected cases

Size 7MB File CSV Current Version 81

Expected update frequency Daily

Date created 30 Jan 2020 Last updated 02 May 2020

Owner :Sudalairaj Kumar Data Scientist at H2O.ai

COVID-19 OPEN RESEARCH DATASET
https://www.semanticscholar.org/cord19

The Semantic Scholar team at the Allen Institute for AI built and released CORD-19 in
collaboration with leading research institutes. Our goal is to provide researchers with
free and open tools and datasets to find new insights about the novel coronavirus.

Resources for Data Scientists from AI2 and Semantic Scholar

SciSpaCy - SpaCy models for biomedical text processing.
SciBERT - A BERT model for scientific text.
Paper Embeddings API - A collection of public APIs for embedding scientific papers.

Owner :Semantic Scholar

 NOVEL CORONAVIRUS CASES, PROVIDED BY JHU CSSE
https://github.com/CSSEGISandData/COVID-19

COVID-19 Data Repository by the Center for Systems Science and Engineering
(CSSE) at Johns Hopkins University

Visual Dashboard (desktop):

https://www.arcgis.com/apps/opsdashboard/index.html#/bda7594740fd40299423467b48e9ecf6

Visual Dashboard (mobile):

http://www.arcgis.com/apps/opsdashboard/index.html#/85320e2ea5424dfaaa75ae62e5c06e61

Lancet Article:
An interactive web-based dashboard to track COVID-19 in real time

Provided by Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE):
https://systems.jhu.edu/
NEXT STRAIN - COVID-19 GENOMICS DATABASE
https://nextstrain.org/ncov/global

4410 genomes sampled between Dec 2019 and Apr 2020.

Shows evolutionary relationships of hCoV-19 (or SARS-CoV-2) viruses from the

Ongoing novel coronavirus COVID-19 pandemic.

Site numbering and genome structure uses Wuhan-Hu-1/2019 as reference.

Genomic epidemiology of novel coronavirus - Global subsampling.

WHO - The Humanitarian Data Exchange
https://data.humdata.org/dataset/coronavirus-covid-19-cases-and-deaths

Source & Contributor: World Health Organisation (WHO)

Date of Dataset : Jan 08, 2020 - Apr 30, 2020 Updated : May 2, 2020

Expected Update Frequency Every day

File Format CSV, Feature Server

COVID19Py 0.3.0 - A tiny Python package for easy access to up-to-date Coronavirus
(COVID-19, SARS-CoV-2) cases data.

https://pypi.org/project/COVID19Py/

Tableau - Coronavirus (COVID-19) Global Data Tracker

https://www.tableau.com/covid-19-coronavirus-data-resources

Domo - BI company Domo has created a complete set of dashboards, both geospatial and non-
geospatial,
using the John Hopkins COVID-19 data that includes topics such as a daily update, maps, testing,
economics, projections, and more.

https://www.domo.com/covid19/geographics/

Google Mobility Reports - Google is using mobility data it collects on its platforms to create and publish
mobility reports that capture changes in mobility patterns in several different place categories such as
Retail & recreation, Parks, Grocery & pharmacy, etc.
ESRI - ESRI is a geospatial software and platform provider that has a wide range of
tools and
products for geospatial analysis to many different private and public organizations
around the world,
from their COVID-19 resource page the features like Global maps and dashboards

https://www.esri.com/en-us/covid-19/overview

Novel Coronavirus (COVID-19) Infection Map - Humanistic GIS Lab at University of

Washington, Seattle

Coronavirus Tracker by Hari Krishna

Confirmed coronavirus cases in Singapore by @ottokyu

COVID-19 free data analysis tool - Addinsoft is releasing a free tool to analyse the
COVID data
published on a daily basis by the ECDC.

https://www.linkedin.com/pulse/covid-19-data-analysis-thierry-fahmy/
Time for Discussion (25
Minutes)
Every participants please provide the suggestions, opinion &
recommendations
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