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Neural Network Programming
with Java

Unleash the power of neural networks by implementing

professional Java code

Fábio M. Soares
Alan M.F. Souza

BIRMINGHAM - MUMBAI
Neural Network Programming with Java

Copyright © 2016 Packt Publishing

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 Credits

Authors Project Coordinator

Fábio M. Soares Kinjal Bari
Alan M.F. Souza
Proofreader
Reviewer Safis Editing
Saeed Afzal
Indexer
Commissioning Editor Hemangini Bari
Amarabha Banerjee
Graphics
Acquisition Editor Disha Haria
Rahul Nair
Production Coordinator
Content Development Editor Nilesh Mohite
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Cover Work
Technical Editor Nilesh Mohite
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Copy Editor
Tani Kothari
 About the Authors

Fábio M. Soares holds a master's degree in applied computing from UFPA and
is currently a PhD candidate at the same university. He has been designing neural
network solutions since 2004 and has developed applications with this technique in
several fields, ranging from telecommunications to chemistry process modeling, and
his research topics cover supervised learning for data-driven modeling.
He is also self-employed, offering services such as IT infrastructure management as
well as database administration to a number of small- and medium-sized companies
in northern Brazil. In the past, he has worked for big companies such as Albras, one
of the most important aluminium smelters in the world, and Eletronorte, a great
power supplier in Brazil. He also has experience as a lecturer, having worked at the
Federal Rural University of Amazon and as a Faculty of Castanhal, both in the state
of Pará, teaching subjects involving programming and artificial intelligence.
He has published a number of works, many of them available in English, all
including the topics of artificial intelligence applied to some problem. His
publications include conference proceedings, such as the TMS (The Minerals Metals
and Materials Society), Light Metals and the Intelligent Data Engineering and
Automated Learning. He has also has published two book chapters for Intech.

I would like to give a special acknowledgement to God for having

given me the opportunity to get access to rich knowledge on this
theme, which I simply love doing research on. Special thanks to my
family, my father, Josafá, and mother, Maria Alice (in memoriam),
who would be very proud of me for this book, and also my brother,
Flávio, my aunt, Maria Irenice, as well as all my relatives who always
supported me in some way during my studies. I would also like to
thank the support of my advisor, Prof. Roberto Limão. I am very
grateful to him for having invited me to work with him on many
projects regarding artificial intelligence and neural networks. Also,
special thanks to my partners and former partners from Exodus
Sistemas, who have helped me in my challenges in programming and
IT infrastructure. Finally, I'd like to thank my friend Alan Souza, who
wrote this book with me, for having extended to me this authorship.
Alan M.F. Souza is computer engineer from Instituto de Estudos Superiores
da Amazônia (IESAM). He holds a post-graduate degree in project management
software and a master's degree in industrial processes (applied computing)
from Universidade Federal do Pará (UFPA). He has been working with neural
networks since 2009 and has worked with IT Brazilian companies developing in
Java, PHP, SQL, and other programming languages since 2006. He is passionate
about programming and computational intelligence. Currently, he is a professor at
Universidade da Amazônia (UNAMA) and a PhD candidate at UFPA.

Since I was a kid, I thought about writing a book. So, this book is a
dream come true and the result of hard work. I'd like to thank God
for giving me this opportunity. I'd also like to thank my father, Célio,
my mother, Socorro, my sister, Alyne, and my amazing wife, Tayná,
for understanding my absences and worries at various moments. I
am grateful to all the members of my family and friends for always
supporting me in difficult times and wishing for my success. I'd like
to thank all the professors who passed through my life, especially
Prof. Roberto Limão for introducing me the very first neural network
concept. I must register my gratitude to Fábio Soares for this great
partnership and friendship. Finally, I must appreciate the tireless
team at Packt Publishing for the invitation and for helping us in the
production process as a whole.
 About the Reviewer

Saeed Afzal, also known as Smac Afzal, is a professional software engineer and
technology enthusiast based in Pakistan. He specializes in solution architecture and
the implementation of scalable high-performance applications.

He is passionate about providing automation solutions for different business needs

on the Web. His current research and work includes the futuristic implementation of
a next-generation web development framework, which reduces development time
and cost and delivers productive websites with many necessary and killer features by
default. He is hopeful of launching his upcoming technology in 2016.

He has also worked on the book Cloud Bees Development by Packt Publishing.

You can found out more about his skills and experience at http://sirsmac.com.
He can be contacted at [email protected].

I would like to thank the Allah Almighty, my parents, and my wife,

Dr. H. Zara Saeed, for all their encouragement.
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 Table of Contents
Preface vii
Chapter 1: Getting Started with Neural Networks 1
Discovering neural networks 2
Why artificial neural network? 2
How neural networks are arranged 4
The very basic element – artificial neuron 5
Giving life to neurons – activation function 5
The fundamental values – weights 6
An important parameter – bias 7
The parts forming the whole – layers 7
Learning about neural network architectures 8
Monolayer networks 8
Multilayer networks 9
Feedforward networks 9
Feedback networks 10
From ignorance to knowledge – learning process 10
Let the implementations begin! Neural networks in practice 11
Summary 18
Chapter 2: How Neural Networks Learn 19
Learning ability in neural networks 19
How learning helps to solve problems 20
Learning paradigms 20
Supervised learning 20
Unsupervised learning 21
Systematic structuring – learning algorithm 22
Two stages of learning – training and testing 23
The details – learning parameters 24
Error measurement and cost function 25

[i]
Table of Contents

Examples of learning algorithms 26

Perceptron 26
Delta rule 27
Coding of the neural network learning 27
Learning parameter implementation 27
Learning procedure 29
Class definitions 30
Two practical examples 37
Perceptron (warning system) 37
ADALINE (traffic forecast) 41
Summary 46
Chapter 3: Handling Perceptrons 47
Studying the perceptron neural network 48
Applications and limitations of perceptrons 48
Linear separation 48
Classical XOR case 50
Popular multilayer perceptrons (MLPs) 52
MLP properties 52
MLP weights 53
Recurrent MLP 54
MLP structure in an OOP paradigm 55
Interesting MLP applications 56
Classification in MLPs 56
Regression in MLPs 58
Learning process in MLPs 60
Simple and very powerful learning algorithm – Backpropagation 61
Elaborate and potent learning algorithm – Levenberg–Marquardt 63
Hands-on MLP implementation! 65
Backpropagation in action 68
Exploring the code 68
Levenberg–Marquardt implementation 72
Practical application – types of university enrolments 75
Summary 78
Chapter 4: Self-Organizing Maps 79
Neural networks' unsupervised way of learning 80
Some unsupervised learning algorithms 80
Competitive learning or winner takes all 82

[ ii ]
 Table of Contents

Kohonen self-organizing maps (SOMs) 84

One-Dimensional SOM 85
Two-Dimensional SOM 86
Step-by-step of SOM learning 88
How to use SOMs 89
Coding of the Kohonen algorithm 90
Exploring the Kohonen class 92
Kohonen implementation (clustering animals) 95
Summary 98
Chapter 5: Forecasting Weather 99
Neural networks for prediction problems 100
No data, no neural net – selecting data 101
Knowing the problem – weather variables 102
Choosing input and output variables 103
Removing insignificant behaviors – Data filtering 103
Adjusting values – data preprocessing 104
Equalizing data – normalization 105
Java implementation for weather prediction 107
Plotting charts 107
Handling data files 108
Building a neural network for weather prediction 109
Empirical design of neural networks 112
Choosing training and test datasets 112
Designing experiments 113
Results and simulations 113
Summary 116
Chapter 6: Classifying Disease Diagnosis 117
What are classification problems, and how can neural networks
be applied to them? 118
A special type of activation function – Logistic regression 119
Multiple classes versus binary classes 120
Comparing the expected versus produced results – the
confusion matrix 121
Classification measures – sensitivity and specificity 122
Applying neural networks for classification 123
Disease diagnosis with neural networks 126
Using ANN to diagnose breast cancer 126
Applying NN for an early diagnosis of diabetes 131
Summary 134

[ iii ]
Table of Contents

Chapter 7: Clustering Customer Profiles 135

Clustering task 136
Cluster analysis 137
Cluster evaluation and validation 138
External validation 138
Applied unsupervised learning 139
Neural network of radial basis functions 139
Kohonen neural network 140
Types of data 141
Customer profiling 142
Preprocessing data 142
Implementation in Java 143
Card credit analysis for customer profiling 143
Summary 149
Chapter 8: Pattern Recognition (OCR Case) 151
What is pattern recognition all about? 152
Definition of classes among tons of data 152
What if the undefined classes are undefined? 153
External validation 154
How to apply neural networks in pattern recognition 154
Preprocessing the data 155
The OCR problem 156
Simplifying the task – digit recognition 156
Approach to digit representation 157
Let the coding begin! 157
Generating data 158
Building the neural network 160
Testing and redesigning – trial and error 161
Results 163
Summary 166
Chapter 9: Neural Network Optimization and Adaptation 167
Common issues in neural network implementations 168
Input selection 168
Data correlation 169
Dimensionality reduction 170
Data filtering 171
Structure selection 171

[ iv ]
 Table of Contents

Online retraining 172

Stochastic online learning 174
Implementation 174
Application 176
Adaptive neural networks 179
Adaptive resonance theory 179
Implementation 180
Summary 182
Appendix A: Setting up the NetBeans Environment 183
Download and install NetBeans 183
Setting up the NetBeans environment 188
Importing a project 191
Programming and running code with NetBeans 194
Debugging with NetBeans 195
Appendix B: Setting Up the Eclipse Environment 199
Download and install Eclipse 199
Setting up the Eclipse environment 204
Importing a project 205
Programming and running code with the Eclipse IDE 210
Debugging with the Eclipse IDE 211
Appendix C: References 213
Chapter 1 – Getting Started with Neural Networks 213
Chapter 2 – How Neural Networks Learn 213
Chapter 3 – Working with Perceptrons 213
Chapter 4 – Self-Organizing Maps 214
Chapter 5 – Forecasting the Weather 214
Chapter 6 – Disease Diagnosis 214
Chapter 7 – Clustering Customer Profiles 215
Chapter 8 – Pattern Recognition (the OCR Case) 215
Chapter 9 – Neural Network Optimization and Adaptation 215
Index 217

[v]
 Preface
The life of a programmer can be described as a continual never-ending learning
pathway. A programmer always faces challenges regarding new technology or new
approaches. Generally, during our lives, although we become used to repeated
things, we are always subjected to learn something new. The process of learning is
one of the most interesting topics in science, and there are a number of attempts to
describe or reproduce the human learning process.

The writing of this book was guided by the challenge of facing new content and
then mastering it. While the name neural networks may appear strange or even give
an idea that this book is about neurology, we strived to simplify these nuances by
focusing on your reasons for deciding to purchase this book. We intended to build
a framework that shows you that neural networks are actually simple and easy to
understand, and absolutely no prior knowledge on this topic is required to fully
understand the concepts we present here.

So, we encourage you to explore the content of this book to the fullest, beholding
the power of neural networks when confronting big problems but always with the
point of view of a beginner. Every concept addressed in this book is explained in easy
language, and also with a technical background. Our mission in this book is to give
you an insight into intelligent applications that can be written using a simple language.

Finally, we would like to thank all those who directly or indirectly have contributed
to this book and supported us from the very beginning, right from the Federal
University of Pará, which is the university that we graduated from, to the data and
component providers INMET (Brazilian Institute of Meteorology), Proben1, and
JFreeCharts. We want to give special thanks to our advisor Prof. Roberto Limão, who
introduced us to the subject of neural networks and coauthored many papers with
us in this field. We also acknowledge the work performed by several authors cited
in the references, which gave us a broader vision on neural networks and insights on
how to adapt them to the Java language in a didactic way.

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