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Intro SP

The document describes the 'sp' package in R, which provides classes and methods for handling spatial data, including points, lines, polygons, and grids. It outlines the structure of spatial data classes, methods for manipulating spatial objects, and how to create and manage spatial data with or without attributes. The document serves as a guide for users to effectively utilize the 'sp' package for spatial data analysis.

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0% found this document useful (0 votes)
7 views21 pages

Intro SP

The document describes the 'sp' package in R, which provides classes and methods for handling spatial data, including points, lines, polygons, and grids. It outlines the structure of spatial data classes, methods for manipulating spatial objects, and how to create and manage spatial data with or without attributes. The document serves as a guide for users to effectively utilize the 'sp' package for spatial data analysis.

Uploaded by

maicolaponte2
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
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You are on page 1/ 21

Classes and Methods for Spatial Data:

the sp Package
Edzer Pebesma∗ Roger S. Bivand†
Feb 2005

Contents
1 Introduction 2

2 Spatial data classes 2

3 Manipulating spatial objects 3


3.1 Standard methods . . . . . . . . . . . . . . . . . . . . . . . . . . 3
3.2 Spatial methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4

4 Spatial points 4
4.1 Points without attributes . . . . . . . . . . . . . . . . . . . . . . 4
4.2 Points with attributes . . . . . . . . . . . . . . . . . . . . . . . . 7

5 Grids 11
5.1 Creating grids from topology . . . . . . . . . . . . . . . . . . . . 11
5.2 Creating grids from points . . . . . . . . . . . . . . . . . . . . . . 13
5.3 Gridded data with attributes . . . . . . . . . . . . . . . . . . . . 14
5.4 Are grids stored as points or as matrix/array? . . . . . . . . . . . 15
5.5 Row and column selection of a region . . . . . . . . . . . . . . . . 16

6 Lines 17
6.1 Building line objects from scratch . . . . . . . . . . . . . . . . . . 17
6.2 Building line objects with attributes . . . . . . . . . . . . . . . . 19

7 Polygons 19
7.1 Building from scratch . . . . . . . . . . . . . . . . . . . . . . . . 19
7.2 Polygons with attributes . . . . . . . . . . . . . . . . . . . . . . . 20
∗ Institutefor Geoinformatics, University of Muenster, Heisenbergstraße 2, 48149 Münster,
Germany. [email protected]
† Economic Geography Section, Department of Economics, Norwegian School of

Economics and Business Administration, Breiviksveien 40, N-5045 Bergen, Norway;


[email protected]

1
8 Importing and exporting data 21

1 Introduction
The sp package provides classes and methods for dealing with spatial data in
R1 . The spatial data structures implemented include points, lines, polygons
and grids; each of them with or without attribute data. We have chosen to
use S4 classes and methods style (Chambers, 1998) to allow validation of ob-
jects created. Although we mainly aim at using spatial data in the geographical
(two-dimensional) domain, the data structures that have a straightforward im-
plementation in higher dimensions (points, grids) do allow this.
From the package home page on CRAN, https://cran.r-project.org/
package=sp, links to a graph gallery with R code, and the development source
tree are found.
This vignette describes the classes, methods and functions provided by sp.
Instead of manipulating the class slots (components) directly2 , we provide meth-
ods and functions to create or modify the classes from elementary types such
as matrices, data.frames or lists and convert them back to any of these types.
Also, coercion (type casting) from one class to the other is provided, where
relevant.
Package sp is loaded by
> library(sp)

2 Spatial data classes


The spatial data classes implemented are points, grids, lines, rings and poly-
gons. Package sp provides classes for the spatial-only information (the topol-
ogy), e.g. SpatialPoints, and extensions for the case where attribute informa-
tion stored in a data.frame is available for each spatial entity (e.g. for points,
the SpatialPointsDataFrame). The available data classes are:
1 The motivation to write this package was born on a pre-conference spatial data workshop

during DSC 2003. At that time, the advantage of having multiple R packages for spatial
statistics seemed to be hindered by a lack of a uniform interface for handling spatial data.
Each package had its own conventions on how spatial data were stored and returned. With
this package, and packages supporting the classes provided here, we hope that R with its
extension packages becomes more coherent for analyzing different types of spatial data.
2 which is possible, but not recommended because validity of resulting objects is no longer

verified

2
data type class attributes contains
points SpatialPoints No Spatial
points SpatialPointsDataFrame data.frame SpatialPoints
multipoints SpatialMultiPoints No Spatial
multipoints SpatialMultiPointsDataFrame data.frame SpatialMultiPoints
pixels SpatialPixels No SpatialPoints
pixels SpatialPixelsDataFrame data.frame SpatialPixels
SpatialPointsDataFrame
full grid SpatialGrid No SpatialPixels
full grid SpatialGridDataFrame data.frame SpatialGrid
line Line No
lines Lines No Line list
lines SpatialLines No Spatial, Lines list
lines SpatialLinesDataFrame data.frame SpatialLines
polygons Polygon No Line
polygons Polygons No Polygon list
polygons SpatialPolygons No Spatial, Polygons list
polygons SpatialPolygonsDataFrame data.frame SpatialPolygons

The class Spatial only holds metadata common to all derived classes (bound-
ing box, coordinate reference system), and is of convenient for defining methods
that are common to all derived classes. In the following sections we will show
how we can create objects of these classes from scratch or from other objects,
and which methods and functions are available to them.

3 Manipulating spatial objects


Although entries in spatial objects are in principle accessible through their slot
name, e.g. x@coords contains the coordinates of an object of class or extending
SpatialPoints, we strongly encourage users to access the data by using func-
tions and methods, in this case coordinates(x) to retrieve the coordinates.

3.1 Standard methods


Selecting, retrieving or replacing certain attributes in spatial objects with at-
tributes is done using standard methods
• [ select "rows" (features) and/or columns in the data attribute table; e.g.
meuse[1:2, "zinc"] returns a SpatialPointsDataFrame with the first
two points and an attribute table with only variable "zinc".

• [[ extracts a column from the data attribute table


• [[<- assign or replace a column in the data attribute table.

3
Other methods available are: plot, summary, print, dim and names (operate
on the data.frame part), as.data.frame, as.matrix and image (for gridded
data), lines (for line data), points (for point data), subset (points and grids),
stack (point and grid data.frames), over for spatial joins, spplot, and length
(number of features).

3.2 Spatial methods


A number of spatial methods are available for the classes in sp:
• dimensions(x) returns number of spatial dimensions

• y = spTransform(x, CRS("+proj=longlat +datum=WGS84")) convert or


transform from one coordinate reference system (geographic projection)
to another (requires package rgdal to be installed)
• bbox(x) returns a matrix with the coordinates bounding box; the dimen-
sions form rows, min/max form the columns
• coordinates(x) returns a matrix with the spatial coordinates
• gridded(x) tells whether x derives from SpatialPixels, or when used in
assignment, coerces a SpatialPoints object into a SpatialPixels object.

• spplot(x) plots attributes, possibly in combination with other types of


data (points, lines, grids, polygons), and possibly in as a conditioning plot
for multiple attributes
• over(x, y) retrieve index or attributes of y corresponding (intersecting)
with spatial locations of x.

• spsample(x) samples point coordinates in the continuous space of SpatialPolygons,


a gridded area, or along a SpatialLines. Subsetting and sample can be
used to randomly subsample full spatial entities.
• geometry(x) strips the data.frame, and returns the geometry-only object

4 Spatial points
4.1 Points without attributes
We can generate a set of 10 points on the unit square [0, 1] × [0, 1] by

> xc = round(runif(10), 2)
> yc = round(runif(10), 2)
> xy = cbind(xc, yc)
> xy

4
xc yc
[1,] 0.67 0.30
[2,] 0.96 0.62
[3,] 0.92 0.91
[4,] 0.77 0.85
[5,] 0.72 0.46
[6,] 0.74 0.39
[7,] 0.63 0.64
[8,] 0.19 0.72
[9,] 0.70 0.20
[10,] 0.37 0.28

this 10 × 2 matrix can be converted into a SpatialPoints object by

> xy.sp = SpatialPoints(xy)


> xy.sp

SpatialPoints:
xc yc
[1,] 0.67 0.30
[2,] 0.96 0.62
[3,] 0.92 0.91
[4,] 0.77 0.85
[5,] 0.72 0.46
[6,] 0.74 0.39
[7,] 0.63 0.64
[8,] 0.19 0.72
[9,] 0.70 0.20
[10,] 0.37 0.28
Coordinate Reference System (CRS) arguments: NA

> plot(xy.sp, pch = 2)

The plot is shown in figure 1.


We can retrieve the coordinates from xy.sp by
> xy.cc = coordinates(xy.sp)
> class(xy.cc)

[1] "matrix" "array"

> dim(xy.cc)

[1] 10 2

and other methods retrieve the bounding box, the dimensions, select points (not
dimensions or columns), coerce to a data.frame, or print a summary:
> bbox(xy.sp)

5
Figure 1: plot of SpatialPoints object; aspect ratio of x and y axis units is 1

6
min max
xc 0.19 0.96
yc 0.20 0.91

> dimensions(xy.sp)

[1] 2

> xy.sp[1:2]

SpatialPoints:
xc yc
[1,] 0.67 0.30
[2,] 0.96 0.62
Coordinate Reference System (CRS) arguments: NA

> xy.df = as.data.frame(xy.sp)


> class(xy.df)

[1] "data.frame"

> dim(xy.df)

[1] 10 2

> summary(xy.sp)

Object of class SpatialPoints


Coordinates:
min max
xc 0.19 0.96
yc 0.20 0.91
Is projected: NA
proj4string : [NA]
Number of points: 10

4.2 Points with attributes


One way of creating a SpatialPointsDataFrame object is by building it from
a a SpatialPoints object and a data.frame containing the attributes:
> df = data.frame(z1 = round(5 + rnorm(10), 2), z2 = 20:29)
> df

z1 z2
1 3.10 20
2 4.15 21
3 3.68 22
4 4.45 23

7
5 6.62 24
6 5.57 25
7 3.66 26
8 3.75 27
9 5.19 28
10 5.02 29

> xy.spdf = SpatialPointsDataFrame(xy.sp, df)


> xy.spdf

coordinates z1 z2
1 (0.67, 0.3) 3.10 20
2 (0.96, 0.62) 4.15 21
3 (0.92, 0.91) 3.68 22
4 (0.77, 0.85) 4.45 23
5 (0.72, 0.46) 6.62 24
6 (0.74, 0.39) 5.57 25
7 (0.63, 0.64) 3.66 26
8 (0.19, 0.72) 3.75 27
9 (0.7, 0.2) 5.19 28
10 (0.37, 0.28) 5.02 29

> summary(xy.spdf)

Object of class SpatialPointsDataFrame


Coordinates:
min max
xc 0.19 0.96
yc 0.20 0.91
Is projected: NA
proj4string : [NA]
Number of points: 10
Data attributes:
z1 z2
Min. :3.100 Min. :20.00
1st Qu.:3.697 1st Qu.:22.25
Median :4.300 Median :24.50
Mean :4.519 Mean :24.50
3rd Qu.:5.147 3rd Qu.:26.75
Max. :6.620 Max. :29.00

> dimensions(xy.spdf)

[1] 2

> xy.spdf[1:2, ] # selects row 1 and 2

8
coordinates z1 z2
1 (0.67, 0.3) 3.10 20
2 (0.96, 0.62) 4.15 21

> xy.spdf[1] # selects attribute column 1, along with the coordinates

coordinates z1
1 (0.67, 0.3) 3.10
2 (0.96, 0.62) 4.15
3 (0.92, 0.91) 3.68
4 (0.77, 0.85) 4.45
5 (0.72, 0.46) 6.62
6 (0.74, 0.39) 5.57
7 (0.63, 0.64) 3.66
8 (0.19, 0.72) 3.75
9 (0.7, 0.2) 5.19
10 (0.37, 0.28) 5.02

> xy.spdf[1:2, "z2"] # select row 1,2 and attribute "z2"

coordinates z2
1 (0.67, 0.3) 20
2 (0.96, 0.62) 21

> xy.df = as.data.frame(xy.spdf)


> xy.df[1:2,]

z1 z2 xc yc
1 3.10 20 0.67 0.30
2 4.15 21 0.96 0.62

> xy.cc = coordinates(xy.spdf)


> class(xy.cc)

[1] "matrix" "array"

> dim(xy.cc)

[1] 10 2

A note on selection with [: the behaviour is as much as possible copied from that
of data.frames, but coordinates are always sticky and a SpatialPointsDataFrame
is always returned; drop=FALSE is not allowed. If coordinates should be dropped,
use the as.data.frame method and select the non-coordinate data, or use [[
to select a single attribute column (example below).
SpatialPointsDataFrame objects can be created directly from data.frames
by specifying which columns contain the coordinates:

9
> df1 = data.frame(xy, df)
> coordinates(df1) = c("xc", "yc")
> df1

coordinates z1 z2
1 (0.67, 0.3) 3.10 20
2 (0.96, 0.62) 4.15 21
3 (0.92, 0.91) 3.68 22
4 (0.77, 0.85) 4.45 23
5 (0.72, 0.46) 6.62 24
6 (0.74, 0.39) 5.57 25
7 (0.63, 0.64) 3.66 26
8 (0.19, 0.72) 3.75 27
9 (0.7, 0.2) 5.19 28
10 (0.37, 0.28) 5.02 29

or

> df2 = data.frame(xy, df)


> coordinates(df2) = ~xc+yc
> df2[1:2,]

coordinates z1 z2
1 (0.67, 0.3) 3.10 20
2 (0.96, 0.62) 4.15 21

> as.data.frame(df2)[1:2,]

xc yc z1 z2
1 0.67 0.30 3.10 20
2 0.96 0.62 4.15 21

Note that in this form, coordinates by setting (specifying) the coordinates


promotes its argument, an object of class data.frame to an object of class
SpatialPointsDataFrame. The method as.data.frame coerces back to the
original data.frame. When used on a right-hand side of an equation, coordinates
retrieves the matrix with coordinates:
> coordinates(df2)[1:2,]

xc yc
1 0.67 0.30
2 0.96 0.62

Elements (columns) in the data.frame part of an object can be manipulated


(retrieved, assigned) directly:
> df2[["z2"]]

10
[1] 20 21 22 23 24 25 26 27 28 29

> df2[["z2"]][10] = 20
> df2[["z3"]] = 1:10
> summary(df2)

Object of class SpatialPointsDataFrame


Coordinates:
min max
xc 0.19 0.96
yc 0.20 0.91
Is projected: NA
proj4string : [NA]
Number of points: 10
Data attributes:
z1 z2 z3
Min. :3.100 Min. :20.00 Min. : 1.00
1st Qu.:3.697 1st Qu.:21.25 1st Qu.: 3.25
Median :4.300 Median :23.50 Median : 5.50
Mean :4.519 Mean :23.60 Mean : 5.50
3rd Qu.:5.147 3rd Qu.:25.75 3rd Qu.: 7.75
Max. :6.620 Max. :28.00 Max. :10.00

Plotting attribute data can be done by using either spplot to colour symbols,
or bubble which uses symbol size:

> bubble(df2, "z1", key.space = "bottom")


> spplot(df2, "z1", key.space = "bottom")
the resulting plots are shown in figure 2.

5 Grids
Package sp has two classes for grid topology: SpatialPixels and SpatialGrid.
The pixels form stores coordinates and is for partial grids, or unordered points;
the SpatialGrid form does not store coordinates but holds full grids (i.e.,
SpatialGridDataFrame holds attribute values for each grid cell). Objects can
be coerced from one representation to the other.

5.1 Creating grids from topology


When we know the offset, the cell sizes and the dimensions of a grid, we can
specify this by using the function GridTopology:

> gt = GridTopology(cellcentre.offset = c(1,1,2), cellsize=c(1,1,1), cells.dim = c(3,4,6))


> grd = SpatialGrid(gt)
> summary(grd)

11
z1

3.1 [3.1,3.804]
3.698 (3.804,4.508]
4.3 (4.508,5.212]
5.148 (5.212,5.916]
6.62 (5.916,6.62]

Figure 2: plot of SpatialPointsDataFrame object, using symbol size (bubble,


top) or colour (spplot, bottom)

12
Object of class SpatialGrid
Coordinates:
min max
[1,] 0.5 3.5
[2,] 0.5 4.5
[3,] 1.5 7.5
Is projected: NA
proj4string : [NA]
Grid attributes:
cellcentre.offset cellsize cells.dim
1 1 1 3
2 1 1 4
3 2 1 6

The grid parameters can be retrieved by the function


> gridparameters(grd)

cellcentre.offset cellsize cells.dim


1 1 1 3
2 1 1 4
3 2 1 6

5.2 Creating grids from points


In the following example a three-dimensional grid is constructed from a set of
point coordinates:
> pts = expand.grid(x = 1:3, y = 1:4, z=2:7)
> grd.pts = SpatialPixels(SpatialPoints(pts))
> summary(grd.pts)

Object of class SpatialPixels


Coordinates:
min max
x 0.5 3.5
y 0.5 4.5
z 1.5 7.5
Is projected: NA
proj4string : [NA]
Number of points: 72
Grid attributes:
cellcentre.offset cellsize cells.dim
x 1 1 3
y 1 1 4
z 2 1 6

13
> grd = as(grd.pts, "SpatialGrid")
> summary(grd)

Object of class SpatialGrid


Coordinates:
min max
x 0.5 3.5
y 0.5 4.5
z 1.5 7.5
Is projected: NA
proj4string : [NA]
Grid attributes:
cellcentre.offset cellsize cells.dim
x 1 1 3
y 1 1 4
z 2 1 6

Note that when passed a points argument, SpatialPixels accepts a tolerance


(default 10 * .Machine$double.eps) to specify how close the points have to be
to being exactly on a grid. For very large coordinates, this value may have to
be increased. A warning is issued if full rows and/or columns are missing.

5.3 Gridded data with attributes


Spatial, gridded data are data with coordinates on a regular lattice. To form
such a grid we can go from coordinates:
> attr = expand.grid(xc = 1:3, yc = 1:3)
> grd.attr = data.frame(attr, z1 = 1:9, z2 = 9:1)
> coordinates(grd.attr) = ~xc+yc
> gridded(grd.attr)

[1] FALSE

> gridded(grd.attr) = TRUE


> gridded(grd.attr)

[1] TRUE

> summary(grd.attr)

Object of class SpatialPixelsDataFrame


Coordinates:
min max
xc 0.5 3.5
yc 0.5 3.5
Is projected: NA
proj4string : [NA]

14
Number of points: 9
Grid attributes:
cellcentre.offset cellsize cells.dim
xc 1 1 3
yc 1 1 3
Data attributes:
z1 z2
Min. :1 Min. :1
1st Qu.:3 1st Qu.:3
Median :5 Median :5
Mean :5 Mean :5
3rd Qu.:7 3rd Qu.:7
Max. :9 Max. :9

Package raster provides dedicated methods to deal with raster data, and can
deal with grids that are too large to be stored in memory.

5.4 Are grids stored as points or as matrix/array?


The form in which gridded data comes depends on whether the grid was created
from a set of points or from a matrix or external grid format (e.g. read through
rgdal). Retrieving the form, or conversion to another can be done by as(x,
"class"), or by using the function fullgrid:
> fullgrid(grd)

[1] TRUE

> fullgrid(grd.pts)

[1] FALSE

> fullgrid(grd.attr)

[1] FALSE

> fullgrid(grd.pts) = TRUE


> fullgrid(grd.attr) = TRUE
> fullgrid(grd.pts)

[1] TRUE

> fullgrid(grd.attr)

[1] TRUE

The advantage of having grids in cell form is that when a large part of the
grid contains missing values, these cells are not stored. In addition, no ordering
of grid cells is required. For plotting by a grid with levelplot, this form is

15
required and spplot (for grids a front-end to levelplot) will convert grids
that are not in this form. In contrast, image requires a slightly altered version
of the the full grid form. A disadvantage of the cell form is that the coordinates
for each point have to be stored, which may be prohibitive for large grids. Grids
in cell form do have an index to allow for fast transformation to the full grid
form.
Besides print, summary, plot, objects of class SpatialGridDataFrame have
methods for
• [ select rows (points) and/or columns (variables)
• [[ extract a column from the attribute table

• [[<- assign or replace a column in the attribute table


• coordinates retrieve the coordinates of grid cells
• as.matrix, as.array retrieve the data as a matrix or array. The first in-
dex (rows) is the x-column, the second index (columns) the y-coordinate,
different attributes the third index. Row index 1 is the smallest x-coordinate;
column index 1 is the larges y-coordinate (top-to-bottom).
• as coercion methods for data.frame, SpatialPointsDataFrame
• image plot an image of the grid

Finally, spplot, a front-end to levelplot allows the plotting of a single grid


plot or a lattice of grid plots.

5.5 Row and column selection of a region


Rows/columns selection can be done when gridded data is in the full grid form
(as SpatialGridDataFrame). In this form also rows and/or columns can be
de-selected (in which case a warning is issued):
> fullgrid(grd.attr) = FALSE
> grd.attr[1:5, "z1"]

Object of class SpatialPixelsDataFrame


Object of class SpatialPixels
Grid topology:
cellcentre.offset cellsize cells.dim
xc 1 1 3
yc 1 1 3
SpatialPoints:
xc yc
[1,] 1 3
[2,] 2 3
[3,] 3 3

16
[4,] 1 2
[5,] 2 2
Coordinate Reference System (CRS) arguments: NA

Data summary:
z1
Min. :4.0
1st Qu.:5.0
Median :7.0
Mean :6.6
3rd Qu.:8.0
Max. :9.0

> fullgrid(grd.attr) = TRUE


> grd.attr[1:2,-2, c("z2","z1")]

Object of class SpatialGridDataFrame


Object of class SpatialGrid
Grid topology:
cellcentre.offset cellsize cells.dim
xc 1 2 2
yc 2 1 2
SpatialPoints:
xc yc
[1,] 1 3
[2,] 3 3
[3,] 1 2
[4,] 3 2
Coordinate Reference System (CRS) arguments: NA

Data summary:
z2 z1
Min. :1.0 Min. :4.0
1st Qu.:2.5 1st Qu.:5.5
Median :3.5 Median :6.5
Mean :3.5 Mean :6.5
3rd Qu.:4.5 3rd Qu.:7.5
Max. :6.0 Max. :9.0

6 Lines
6.1 Building line objects from scratch
In many instances, line coordinates will be retrieved from external sources. The
following example shows how to build an object of class SpatialLines from
scratch. Note that the Lines objects have to be given character ID values, and

17
that these values must be unique for Lines objects combined in a SpatialLines
object.

> l1 = cbind(c(1,2,3),c(3,2,2))
> l1a = cbind(l1[,1]+.05,l1[,2]+.05)
> l2 = cbind(c(1,2,3),c(1,1.5,1))
> Sl1 = Line(l1)
> Sl1a = Line(l1a)
> Sl2 = Line(l2)
> S1 = Lines(list(Sl1, Sl1a), ID="a")
> S2 = Lines(list(Sl2), ID="b")
> Sl = SpatialLines(list(S1,S2))
> summary(Sl)

Object of class SpatialLines


Coordinates:
min max
x 1 3.05
y 1 3.05
Is projected: NA
proj4string : [NA]

> plot(Sl, col = c("red", "blue"))

18
6.2 Building line objects with attributes
The class SpatialLinesDataFrame is designed for holding lines data that have
an attribute table (data.frame) attached to it:
> df = data.frame(z = c(1,2), row.names=sapply(slot(Sl, "lines"), function(x) slot(x, "ID"))
> Sldf = SpatialLinesDataFrame(Sl, data = df)
> summary(Sldf)

Object of class SpatialLinesDataFrame


Coordinates:
min max
x 1 3.05
y 1 3.05
Is projected: NA
proj4string : [NA]
Data attributes:
z
Min. :1.00
1st Qu.:1.25
Median :1.50
Mean :1.50
3rd Qu.:1.75
Max. :2.00

Not many useful methods for it are available yet. The plot method only plots
the lines, ignoring attribute table values. Suggestions for useful methods are
welcome.

7 Polygons
7.1 Building from scratch
The following example shows how a set of polygons are built from scratch.
Note that Sr4 has the opposite direction (anti-clockwise) as the other three
(clockwise); it is meant to represent a hole in the Sr3 polygon. The default
value for the hole colour pbg is "transparent, which will not show, but which
often does not matter, because another polygon fills the hole — here it is set
to "white". Note that the Polygons objects have to be given character ID
values, and that these values must be unique for Polygons objects combined in
a SpatialPolygons object.
> Sr1 = Polygon(cbind(c(2,4,4,1,2),c(2,3,5,4,2)))
> Sr2 = Polygon(cbind(c(5,4,2,5),c(2,3,2,2)))
> Sr3 = Polygon(cbind(c(4,4,5,10,4),c(5,3,2,5,5)))
> Sr4 = Polygon(cbind(c(5,6,6,5,5),c(4,4,3,3,4)), hole = TRUE)
> Srs1 = Polygons(list(Sr1), "s1")

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> Srs2 = Polygons(list(Sr2), "s2")
> Srs3 = Polygons(list(Sr3, Sr4), "s3/4")
> SpP = SpatialPolygons(list(Srs1,Srs2,Srs3), 1:3)
> plot(SpP, col = 1:3, pbg="white")
> # plot(SpP)

7.2 Polygons with attributes


Polygons with attributes, objects of class SpatialPolygonsDataFrame, are built
from the SpatialPolygons object (topology) and the attributes (data.frame).
The row.names of the attributes data frame are matched with the ID slots of
the SpatialPolygons object, and the rows of the data frame will be re-ordered
if necessary.

> attr = data.frame(a=1:3, b=3:1, row.names=c("s3/4", "s2", "s1"))


> SrDf = SpatialPolygonsDataFrame(SpP, attr)
> as(SrDf, "data.frame")

a b
s1 3 1
s2 2 2
s3/4 1 3

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> spplot(SrDf)

b
3.0

2.5

2.0
a

1.5

1.0

or, as another way to create the SpatialPolygonsDataFrame object:


> SrDf = attr
> polygons(SrDf) = SpP

8 Importing and exporting data


Data import and export from external data sources and file formats is han-
dled inthe rgdal package in the first instance, using the available OGR/GDAL
drivers for vector and raster data. This keeps the range of drivers up to date,
and secures code maintenance through working closely with the open source
geospatial community. Mac OSX users unable or unwilling to install rgdal from
source after installing its external dependencies will find some functions in the
maptools package to import and export a limited range of formats.

References
Chambers, J.M., 1998, Programming with data, a guide to the S language.
Springer, New York.

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