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LAB MANUAL
PHD112
CELL BIOLOGY
Name : __________________________________
Group : __________________________________
Matric No. : __________________________________
1
PRACTICAL 1 a): THE PROPER USE AND CARE OF MICROSCOPE (CO2)
Introduction:
The function of any microscope is to enhance resolution. The microscope is used to create an
enlarged view of an object such that we can observe details not otherwise possible with the
human eye. Because of the enlargement, resolution is often confused with magnification, which
refers to the size of an image. In general, the greater the magnification, the greater the
resolution, but this is not always true. There are several practical limitations of lens design which
can result in increased magnification without increased resolution.
The microscope is absolutely essential to the microbiology lab because most microorganisms
cannot be seen without the aid of a microscope, except some fungi. And, there are some
microbes which cannot be seen even with a microscope, unless it is an electron microscope,
such as the viruses.
You will be using an assigned light microscope for a variety of lab exercises through the
semester. Therefore, it is extremely important that you understand how to use the microscope
effectively and how to use different types of microscopy: bright field, phase-contrast, and dark
field.
You will also get your first exposure to the preparation of an animal cell smear and subsequent
staining of it. However, you are making a simple stain using only one dye. Everything on the
slide will be the same color, but you can distinguish among shapes, sizes, and arrangements of
the cell.
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Figure 1.0: Parts of the typical microscope.
Parts Function
Ocular, or eyepiece A lens of a given magnification, which probably engraved on the rim-for
example 10X.
Revolving nosepiece Plate capable of rotation that allows utilizing of objectives of different
magnifications.
Objectives : Lenses of varying magnifications. The values are usually engraved on
the objectives.
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Condenser A lens system that concentrates light from the illumination source so
that a cone of light fills the aperture of the objective. Microscope may
be equipped with a movable condenser.
Diaphragm A plate with an aperture allowing for varying amounts of light to pass
through the specimen. Open and close the diaphragm by adjusting it
with its handle so that varying intensities of light are visible through the
ocular.
Base with illuminator Platform on which the microscope is structured, usually containing an
electric light source.
Objectives:
Materials:
Microscope Toothpicks
Microscope slides Tissue paper
Coverslips Lens tissue
Prepared slides Paramecium Iodine tincture (dropper)
Alcohol 70% (spray bottle) Sterile Cotton swab
Filter Paper(cut small )
Procedure:
Today you will learn how to use the microscope correctly and safely. You will be provided with
all the materials needed and you will work in pair per microscope.
To measure the mastery of the above objective, you will be required to:
2. Demonstrate the ability to clearly focus at tissue or cell levels of the specimen on the
slide at any magnifications (X40, 100, 400 or 1000).
3. Distinguish the tissue from the cells on a given slide at any magnifications.
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Microscopy
Use both hands when carrying a microscope. Firmly secure one hand under the base and the
other around the arm. Examine the microscope to learn the location and function of all the
essential part (Figure 1.0) as listed in Table 1.0. At your lab station, plug the microscope into an
outlet.
Magnification
A compound microscope employs at least two lenses. The first lens will be the ocular, or
eyepiece. The ocular lens usually has a magnification power of 10. This is written as 10X. The
other lenses are objective lenses. They will have magnification power of varying degrees. They
usually will range from 4X to 100X. The 4X will be the low power, or scanning lens. The higher
power lenses will usually be 10X, 40X and 100X. In this exercise, you will not use the 100X
power lens often referred to as an immersion oil lens. It is for viewing very small cells such as
bacteria.
The total magnification of the specimen will be the power of the ocular lens multiplied by the
power of the objective lens. For example, if the ocular is 10X and the objective lens in use is
10X, the total magnification of the specimen will be:
10X x 10X = 100X.
1. Turn on the microscope. Turn the course focus so that the stage and objectives lenses
are as far as possible.
2. Put the slide on the stage and carefully click the lowest power into place.
3. While looking into the eyepiece, slowly turn the course focus until a rough image
appears. This may take some time as you become accustomed to using the lenses. You
probably also need to move the stage to the left and right and back and forth to center
the image.
4. After you have a rough image, use the fine focus to make the image as clear as
possible. You may need to use the diaphragm to adjust the level of light.
Switching to an objective lens with a higher magnification will demonstrate another fundamental
characteristic of compound light microscopes: They are parfocal. That is, if an image is in focus
under low power and you switch to a higher power, the image should still roughly be in focus.
You should only have to make small adjustments with the fine focus to view a clear image.
1. Switch to the next higher magnification. Be careful to avoid ‘smashing’ the objective lens
into the slide. The higher the magnification, the longer the lens!
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2. Using the fine focus, bring the image into clear focus. Did you have to adjust the level of
light as you increased the magnification?
3. To use an oil immersion lens, first focus on the area of specimen to be observed with the
high dry (400x) lens.
4. Place a drop of immersion oil on the cover slip over that area, and very carefully swing
the oil immersion lens into place.
5. Focus carefully, preferably by observing the lens itself while bringing it as close to the
cover slip as possible, then focusing by moving the lens away from the specimen.
6. When in focus the lens nearly touches the cover slip. The focal plane is so narrow that it
is very easy to focus right past it. If you are focusing toward the specimen, you can drive
the lens right into it.
Use an oil immersion lens when you have a fixed (dead - not moving) specimen that is no
thicker than a few micrometers. Even then, use it only when the structures you wish to view are
quite small - one or two micrometers in dimension. Oil immersion is essential for viewing
individual bacteria or details of the striations of skeletal muscle. It is nearly impossible to view
living, motile protists at a magnification of 1000x, except for the very smallest and slowest.
A disadvantage of oil immersion viewing is that the oil must stay in contact, and oil is viscous. A
wet mount must be very secure to use oil. Oil immersion lenses are used only with oil, and oil
can't be used with dry lenses, such as your 400x lens. Lenses of high magnification must be
brought very close to the specimen to focus and the focal plane is very shallow, so focusing can
be difficult. Oil distorts images seen with dry lenses, so once you place oil on a slide it must be
cleaned off thoroughly before using the high dry lens again. Oil on non-oil lenses will distort
viewing and possibly damage the coatings.
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Section A : Observation, labeling and drawing of the specimen
10 X 4 magnification:________________________
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10 X 10 magnification:________________________
40 X 10 magnification:________________________
2. Use the toothpick or swab, gently scrape the inside of your cheek.
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Figure 1.2: Preparation of a Wet Mount
3. Smear the toothpick or swab onto the slide.
6. Put the slide onto the microscope and view it under low power.
Magnification___ x____
_________________________________
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The Do’s and Don’ts when handling the microscope:
1. The Do's
a. ______________________________________________________
b. ______________________________________________________
c. ______________________________________________________
d. ______________________________________________________
2. The Don'ts
a. ______________________________________________________
b. ______________________________________________________
c. ______________________________________________________
d. ______________________________________________________
10
Questions:
1. What are the magnifications of the various eyepiece and objective lenses?
_________________________________________________________
2. Why do you let in more light when you go from a low magnification objective to a higher
magnification objective?
_________________________________________________________
3. Why do you hold the microscope at the bottom when carrying it around?
_________________________________________________________
Rubric
Total marks 0 3
3
B. Slides’ drawings
C. Do and Don’t’s
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D. Functions
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E. Questions
TOTAL MARKS
FOR PRACTICAL 1 40
12
PRACTICAL 1 (b): CELL DIVISION
• To prepare your own specimens of onion root in which you can visualize all of the
stages of mitosis
• To identify all of the stages of mitosis
• To explain each stage of mitosis
Introduction:
Cell division is a process by which a cell, called the parent cell, divides into two cells,
called daughter cells. Cell division is usually a small segment of a larger cell cycle. In
meiosis, however, a cell is permanently transformed and cannot divide again.
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Figure 3.0 : Mitosis process
Mitosis and cytokinesis jointly define the mitotic (M) phase of the cell cycle, the division
of the mother cell into two sister cells, each with the genetic equivalent of the parent
cell. Mitosis occurs most often in eukaryotic cells. In some cases it occurs in post-
karotic cells. In multicellular organisms, the somatic cells undergo mitosis, while germ
cells — cells destined to become sperm in males or ova in females — divide by a
related process called meiosis. Prokaryotic cells, which lack a nucleus, divide by a
process called binary fission.
Onion roots consist of different regions. The root cap functions in protection. The zone
of cell division is where mitosis is actively occurring. The zone of elongation is where
growth occurs (cells get bigger). The zone of specialisation is where root hairs develop
and where cells differentiate into specialised tissues.
Materials:
Microscope Iodine
Lens tissue Forceps
Tissue paper Prepared slide –fish & onion mitosis
Filter paper (cut small) Distilled water
Microscope glass slide
Cover slips
scissor
Procedure:
1. Cut 1mm section from an onion root tip and transfer the root tip onto a clean
microscope glass slide.
2. Cover the root tip with a cover slip and gently mesh the root tip by pressing on
the coverslip.
3. Place 1 or 2 drops of iodine stain at the side of coverslip and allow stain to seep
through the root tip for 5 minutes.
4. Wipe off excess stain. Examine under the microscope using high power objective
(40X or 100X).
5. Try to identify all the stages of mitosis. Draw all the identifiable stages separately
and explain what’s happen during each stage.
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Results And Discussion
________________________________________________________________
________________________________________________________________
________________________________________________________________
________________________________________________________________
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Stage 2: _____________ Magnification: ________
_______________________________________________________________
________________________________________________________________
________________________________________________________________
_______________________________________________________________
________________________________________________________________
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Stage 4: _____________ Magnification: ________
_______________________________________________________________
________________________________________________________________
________________________________________________________________
_______________________________________________________________
________________________________________________________________
_________________________________________________________________
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Questions:
3. Give 2 reasons why we use onion roots for viewing mitosis. (2 marks)
________________________________________________________
________________________________________________________
________________________________________________________
________________________________________________________
5. Which part of the mitosis that the chromosomes cross over take place?
______________________________________________________
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RUBRICS SCHEME FOR EXPERIMENT 3 (CO2)
A.Student’s performance in the lab
Total marks 0 4
4
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Stage 5 No drawings 1) Name of stage
2) Drawings and labeling of
- sister chromatid /
chromosomes
- cell membrane/cell wall
3) magnification
- Unable to describe correctly - Able to describe correctly
- Unable to relate the - Able to relate the explanation
explanation with the diagram. with the diagram
Total marks 0
30
C. General Questions
Total marks
40
20
PRACTICAL 2 (a)
MENDELIAN GENETICS
Introduction:
In heredity, we are concerned with the occurrence, every time an egg is fertilized, of the
probability that a particular gene or chromosome will be passed on through the egg, or
through the sperm, to the offspring. As you know, genes and chromosomes are present
in pairs in each individual, and segregate as they go into the gametes (egg and sperm).
There are two possible genes that the egg or sperm might obtain from each pair, but it
actually receives only one of them. If the probability of getting either one is equal, this
probability can be expressed as 1/2, like the probability of getting heads or tails when
you flip a penny. But one cannot examine the genes in a sperm or egg. One must wait
until fertilization has occurred and a new individual has been produced, and some
characteristic controlled by the genes has had time to develop. Thus, we are faced with
the probability that it will go into the sperm, together with the probability that these will
combine at fertilization.
Procedure:
1. Given the list of characteristics below, you will create an imaginary pet and then
breed it to review the concepts of genetics. Your pet will have the following
possible characteristics:
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Characteristic Trait (phenotype)
2. The genetics of these characteristics and their traits are summarized in the table
below:
Gender male XY
female XX
orange ff
Eyes round EE or Ee
square ee
Nose triangle NN or Nn
oval nn
Teeth pointed TT or Tt
square tt
3. Work in teams of two. Each person needs to design her or his own pet for the
original parents. You will get to mate them later. Determine the genotype for each
of the characteristics for your pet in the following manner: To simulate the
random way chromosomes are divided up during meiosis into egg and
sperm, you will flip a coin to determine what kind of allele for each trait your
pet inherits from each parent.
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THE RULES: HEADS = Dominant allele | TAILS = Recessive allele
4. Each of you will be filling out your chart SEPARATELY. Each of you will have
DIFFERENT information. One of you will be the male pet of the pair and one of
you will end up being the female pet of the breeding pair. Just flip a coin to decide
this. But for all other traits you must use the coin flipping rules from procedure
number 3. Flip the coin for each allele for each trait in the chart below to determine
the genotype and phenotype of your new pet, and then write it in the chart.
Skin color
Eyes
Nose
Teeth
Gender
(9 marks)
5. Place the information from your chart on index cards, so we can start making a
poster of your new pet family.
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7. Your pet now mates with your partner’s paper pet. There are four offspring in the
new family. For each characteristic, use a Punnett square on the next page to
determine all of the possible genotypes of the offspring.
8. To choose which one of the squares in your Punnett square is the trait for each of
your pet’s four offspring use this coin toss system:
PUNNET SQUARES
phenotype:
___________ x ___________
genotype:
____________ x ____________
(2 marks)
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2. Trait: EYES
phenotype:
___________ x ___________
genotype:
____________ x ____________
(2 marks)
3. Trait: NOSE
phenotype:
___________ x ___________
genotype:
____________ x ____________
(2 marks)
4. Trait: TEETH
phenotype:
___________ x ___________
genotype:
____________ x ____________
(2 marks)
5. Trait: GENDER
phenotype:
___________ x ___________
genotype:
____________ x ____________
(2 marks)
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9. Summarize the traits for each pet offspring in the chart below. You will repeat this
coin toss method 4 times: Once for each of the paper pet’s four offspring in the
new family.
genotype
Offspring 1
phenotype
genotype
Offspring 2
phenotype
genotype
Offspring 3
phenotype
genotype
Offspring 4
phenotype
(20 marks)
10. Use colored paper, scissors, and glue to create the parents and four offspring in your
paper pet’s new family. Glue the index card with the parent’s information to the poster as
well. Name each pet and give the whole family a family name.
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PRACTICAL 2 (b)
HUMAN KARYOTYPING
Introduction:
Each species has a characteristic number of chromosomes; for example, corn cells
have 20 chromosomes, mouse cells have 40 chromosomes, and human cells have 46
chromosomes. In order to view the chromosomes so that they may be counted, a cell
will be allowed to reproduce and colchicine is added to stop the cell division during
metaphase. The resulting cells are placed in a hypotonic solution that causes the cell
membranes to rupture. The chromosomes are stained and photographed. The
chromosomes may then be cut out of the photograph and arranged by homologous
pairs. The homologous pairs are identified and arranged in order by size (with the
exception of the sex chromosomes; these appear last). These tests are typically done
on a sample of blood, although any body cell could be used. The cell must be
undergoing mitosis – preferably in metaphase – so that the chromosomes are
replicated, condensed, and visible under a microscope. The resulting display is called a
karyotype.
Some of the abnormalities associated with chromosome structure and number can be
detected by a test called a karyotype. A karyotype can show prospective parents
whether they have certain abnormalities that could be passed on to their offspring, or it
may be used to learn the cause of a child’s disability. Karyotypes can also reveal the
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gender of a fetus or test for certain defects through examination of cells from uterine
fluid – a procedure called amniocentesis – or through sampling of placental
membranes.
Materials:
Procedure:
1. You will be givena blank karyotype form and an enlarged photograph of a spread
of chromosomes from a human leucocyte. Record on your karyotype form the
Subject Number that appears at the top of your sheet of chromosomes.
2. Count the chromosomes on your sheet (this initial count should give you a
preliminary idea about the nature of your subject). Now carefully cut out each
chromosome (leave white space around each chromosome rather than trying to
cut exactly on the margin of the image). Share the work with your partner. Be
careful not to lose any chromosomes.
3. Find the homologous pairs by matching length, the position of the centromere, and
the banding patterns if present. All three of these elements may be needed to
make an accurate match.
4. Arrange the pairs on the karyotype form in order from longest to shortest, with the
exception of the sex chromosomes, X and Y. These appear last. The sex
chromosomes are obviously not a homologous pair: the X chromosome is of
medium length, intermediate between chromosomes 4 and 5; the Y is one of the
smaller chromosomes, similar in length to chromosome 14.
5. Lightly tape the chromosomes in place. Don't use a lot of tape initially – have your
instructor check your work, then tape more securely.
6. Once your chromosomes are all cut out and included in the karyotype, answer the
questions and complete the lab.
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Karyotype # _____
1 2 3 4 5
6 7 8 9 10 11 12
13 14 15 16 17 18
19 20 21 22 23
(24 marks)
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Figure 5.2: Human Karyotype Chart
Questions:
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A.Student’s performance in the lab
0 mark 1 mark
Sex of the pet Unable to label correctly Able to label correctly
0 mark 1/2 mark each
Table 1 Unable to label correctly Able to label correctly
0 mark 2 marks each
Punnet Squares Unable to give correct answer Able to give correct answer
0 mark 1/2 mark each
Table 2 Unable to label correctly Able to label correctly
0 mark 1 - 24 marks
Karyotype Unable to label correctly Able to label correctly
0 mark 1 - 6 marks
Questions Unable to give correct answer Able to give correct answer
31
PRACTICAL 3: TISSUES
Introduction :
In today’s lab session, you will examine commercially prepared slides of the various types of
tissues.
Materials :
Procedure :
1. Works individually.
(2 marks)
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A2. What kind of epithelium forms these structures? (1 mark)
____________________________________________________________________________
(2 marks)
(2 marks)
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A6. What kind of epithelium lines the lumen of trachea? (1 mark)
____________________________________________________________________________
(2 marks)
_____________________________________________________________________
(2 marks)
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B4. Describe the location of blood cells in the body. (1 mark)
____________________________________________________________________________
(2 marks)
(2 marks)
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C2. How are the cells arranged? (1 mark)
___________________________________________________________
(2 marks)
____________________________________________________________________________
____________________________________________________________________________
(2 marks)
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C6. Differentiate the appearance of smooth muscle tissue from the other two types of muscle
examined previously. (2 marks)
____________________________________________________________________________
____________________________________________________________________________
___________________________________________________________________________
Answer: __________________________
D2. Outside the brain and spinal cord, which cells provide insulation to nerves? (1 mark)
Answer: __________________________________
37
RUBRICS SCHEME FOR ODL EXPERIMENT 5 (CO2)
B5 /2
C1 /2
C3 /2
C5 /2
TOTAL / 18
B. Questions
38