Hejny 2016
Hejny 2016
a
Institute of Mineralogy and Petrography, University of Innsbruck, Innrain 52, Innsbruck A-6020, Austria, and bLaboratory
of Crystallography, University of Belgrade, Dušina 7, Belgrade 11000, Serbia. *Correspondence e-mail:
[email protected]
Received 15 July 2015
Accepted 18 November 2015
Single-crystal X-ray diffraction of Cs3ScSi6O15 shows the presence of main
reflections and satellite reflections up to the fourth order along the c* direction.
Edited by M. Dusek, Academy of Sciences of the The (3+1)-dimensional incommensurately modulated structure was solved in
Czech Republic, Czech Republic superspace group X 3 m1ð00Þ0s0 [a = 13.861 (1), c = 6.992 (1) Å, V =
1163.4 (2) Å3] with a modulation wavevector q = 0.14153 (2)c*. Refinement of
Keywords: incommensurately modulated crystal
three modulation waves for positional and anisotropic displacement parameter
structure; (3+1)-dimensional refinement; fourth-
order satellite reflections; mixed tetrahedral– values for all atoms converged to Robs values for all, main and satellite
octahedral framework. reflections of first, second and third order of 0.0200, 0.0166, 0.0181, 0.0214 and
0.0303, respectively. Cs3ScSi6O15 forms a mixed tetrahedral–octahedral frame-
CCDC reference: 1437877 work with prominent six-membered rings of [SiO4]-tetrahedra interconnected
by [ScO6]-octahedra. Apart from Sc, all atoms are strongly affected by positional
B-IncStrDB reference: 11472EwF4su
modulation with maximum atomic displacements of up to 0.93 Å causing rigid
polyhedral arrangements to perform tilt and twist movements relative to each
Supporting information: this article has
supporting information at journals.iucr.org/b other, such as a rotation of the Sc-octahedra around the 3 -axis by over 38 . Cs
has an irregular coordination environment; however, considering distances up to
3.5 Å, the bond-valence sum changes by no more than 0.02 as a function of t and
thus overall kept at a level of ca 1.075.
1. Introduction
In the field of applied inorganic chemistry, caesium containing
silicates have been studied for two main reasons: (i) tailoring
of materials that can serve as radioactive waste deposits for
137
Cs and (ii) the search for new luminescent compounds that
may be used for the development of new circuits and devices
for electronic, optoelectronic as well as communications
industries.
Due to its short half-life of about 30 years, 137Cs has high
activity and is still the main source of beta-radiation after the
nuclear disasters related to the accidents in the power plants
of Chernobyl and Fukushima Dai-ichi (Povinec et al., 2013;
Steinhauser et al., 2014). Several phases have been proposed in
the past as potential hosts for the immobilization of radio-
active caesium including porous framework structures such as
pollucite (CsAlSi2O6), CsAlSiO4 or CsAlSi5O12 (Rodriguez et
al., 2013; Gatta et al., 2008; Fisch et al., 2008) or mica-related
compounds such as Cs-annite [CsFe3(AlSi3)O10(OH)2] (Klika
et al., 2006).
On the other hand, quite a number of caesium-bearing
synthetic oxosilicates containing trivalent rare earth element
(REE) cations that can be potentially used as host lattices for
luminescence have been disclosed in the literature. Examples
include Cs3NdSi8O19 and CsNd2Si21O48 (Schäfer & Schleid,
2009), Cs3EuSi6O15 (Huang et al., 2005), Cs3DySi6O15 (Zhao et
# 2016 International Union of Crystallography al., 2010), Cs1.86K1.14DySi6O15 and Cs1.6K1.4SmSi6O15 (Wierz-
110 Clivia Hejny et al. (3+1)-Incommensurately modulated structure of Cs3ScSi6O15 Acta Cryst. (2016). B72, 109–116
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2.3. Single-crystal diffraction
An optically homogeneous crystal, showing sharp and clear
extinction under crossed polarizers with dimensions 51 94
134 mm was selected and mounted for X-ray diffraction data
collection on an Oxford Diffraction Gemini four-circle
diffractometer, equipped with a Ruby CCD detector and using
graphite-monochromated Mo K radiation (50 kV, 40 mA).
Data collection was performed at room temperature. Data
reduction included intensity integration, background and
Lorentz–polarization correction performed with the Crys-
AlisPro software package (Agilent, 2012). The morphology of
the fragment was approximated by ten external faces and an
analytical absorption correction based on these indexed faces
was applied. Experimental details of data collection and
structure refinement are summarized in Table 1.
According to the analysis of a quick pre-experiment, full
intensity data collection of a half-sphere in reciprocal space
with an exposure time of 80 s per frame and an !-step size of
0.5 was chosen. Initial attempts to find a unit cell gave
unrealistically large values. Therefore, only reflections with
the strongest intensity were used to find a hexagonal cell of a =
13.861 (1), c = 6.992 (1) Å. Inspection of the distribution
histograms of the remaining unindexed reflections clearly
showed them to be satellite reflections of up to third order in
the c* direction. The modulation wavevector was subse-
quently refined to q = 0.14153 (2)c*. This is close to but
distinctly different from 1/7. In consideration of the high
intensity of the satellite reflections and the fact that the pairs
of satellite reflections with m = +3/4 and m = 3/+4 have
very close positions along c*, the data were subject to another
thorough re-examination that revealed the presence also of
fourth-order satellite reflections. However, it was not possible
to integrate and use these fourth-order satellite reflections for
the structure refinement.
Acta Cryst. (2016). B72, 109–116 Clivia Hejny et al. (3+1)-Incommensurately modulated structure of Cs3ScSi6O15 111
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tions for Cs, Sc, Si and three O atoms. Structure refinement
with JANA2006 of these six atomic positions each with one
positional and an anisotropic displacement parameter (ADP)
modulation wave quickly converged to a Robs value for all
reflections of below 0.1. Subsequent refinement of three
modulation waves for positional and ADP values smoothly
converged to Robs values for all, main, and satellite reflections
of first, second and third order of 0.02, 0.0166, 0.0181, 0.0214
and 0.0303, respectively. The refined positional parameters
and the anisotropic displacement parameters including their
modulations can be found as supporting information in CIF
format. A graphical presentation of electron density sections
are given in Figs. S3–S8.
Figure 3
(a) The 3d-average structure of Cs3ScSi6O18 in a view along the c-axis. (b)
Approximant structure of (3+1)-incommensurately modulated
Cs3ScSi6O18 for seven unit cells along the c-axis.
112 Clivia Hejny et al. (3+1)-Incommensurately modulated structure of Cs3ScSi6O15 Acta Cryst. (2016). B72, 109–116
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Table 2
Interatomic distances (Å) and angles ( ) of Cs3ScSi6O15.
(3+1) average: average distance in the (3+1)-incommensurately modulated
structure. 3d average: distance in the average structure calculated from only
main reflections without the contribution of the satellite reflections.
(3+1) (3+1) (3+1) 3d
min–max range average average
Cs—O1 (4) 3.187 (5)–3.405 (5) 0.218 3.274 (4) 3.212 (1)
Cs—O3 (2) 3.256 (2)–3.360 (2) 0.104 3.309 (2) 3.300 (2)
Cs—O3 (4) 3.204 (6)–3.829 (6) * 3.505 (6) 3.480 (2)
Cs—O2 (2) 3.319 (7)–5.022 (7) * 4.193 (5) 3.495 (1)
Cs—O1 (2) 3.262 (7)–5.661 (7) * 4.415 (6) > 4.4
Sc—O3 (6) 2.100 (2)–2.122 (2) 0.022 2.111 (2) 2.068 (1)
Si—O1 (2) 1.614 (5)–1.653 (5) 0.039 1.622 (5) 1.596 (1)
Si—O2 (1) 1.611 (3)–1.638 (3) 0.027 1.628 (2) 1.568 (1)
Si—O3 (1) 1.567 (2)–1.571 (2) 0.004 1.569 (2) 1.562 (1)
O1—Si—O1 105.0 (2)–107.2 (2) 2.2 106.0 (2) 104.6 (1)
O1—Si—O2 101.8 (2)–107.1 (2) 5.4 104.6 (2) 104.4 (1)
O1—Si—O3 114.0 (2)–115.7 (2) 1.7 114.8 (2) 115.8 (1)
O2—Si—O3 110.6 (1)–111.6 (1) 1.0 111.1 (1) 110.8 (1)
Si—O1—Si 124.7 (2)–177.8 (3) 53.1 149.7 (2) 150.7 (1)
Si—O2—Si 144.8 (4)–179.9 (2) 35.1 154.9 (3) 180.0
Si—O3—Sc 147.0 (2)–154.2 (1) 7.2 150.5 (2) 154.2 (1)
For interatomic distances exceeding 3.5 Å in some parts of the modulated structure the
value for the range of the respective distance has been omitted (*), because such large
interatomic distances are not considered bonding distances any more and a value for the
range would therefore be misleading.
Acta Cryst. (2016). B72, 109–116 Clivia Hejny et al. (3+1)-Incommensurately modulated structure of Cs3ScSi6O15 113
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Table 3
Coordination sequences {Nk} of the Si and Sc atoms as well as the extended point symbols in Cs3ScSi6O15.
Coordination sequences {Nk} (k = 1–14)
1 2 3 4 5 6 7 8 9 10 11 12 13 14 Extended point symbol
coordination environment of Cs in the modulated structure is (Si, Sc) and the anions (O). Each node of this sub-structure
irregular because all Cs—O interatomic distances vary as a can be classified by its coordination sequence {Nk} (Brunner &
function of t (see Table 2, Fig. S16 in the supporting infor- Laves, 1971). It has to be emphasized that two crystal-
mation). The six O atoms closest to Cs, O1 and O3 remain lographically independent nodes can be topologically
within a distance of < 3.4 Å. However, O atoms at further equivalent and expressed in equal values of {Nk}. The coor-
distance from Cs move in and out of the coordination sphere dination sequences as well as the corresponding extended
as a function of t. Even atoms that are certainly not being point symbols [listing all shortest circuits for each angle for
considered as bonding to Cs in the average structure move any non-equivalent atom; Blatov et al. (2010)] have been
into the bonding distance, such as Cs—O1 with an atomic calculated using the TOPOS program suite (Blatov et al., 2014)
distance of over 4.4 Å in the average structure in comparison (see Table 3). For the determination of the extended point
with a distance of 3.262 (7) Å at t = 0.18 and t = 0.68 in the symbols the O atoms have been excluded. Subsequently, so-
modulated structure. Considering the coordination sphere of called polyhedral microensembles (PMEs) were constructed.
Cs up to 3.5 Å the coordination of Cs is nine- to 11-fold with a On the lowest sub-level they are formed for each octahedron
bond-valence sum of 1.066–1.087 as a function of t. The and tetrahedron in the asymmetric unit by considering all
average bond-valence sum of 1.071 (1) of Cs in the modulated directly bonded [MX6]- and [TX4]-groups. They can be
structure is slightly increased in comparison to the value of considered as above-polyhedral invariants of the crystal
0.985 (1) in the 3d-average structure (see Fig. 6). structure and represent a geometrical interpretation of the
coordination sequences up to k = 3. The PMEs of the first sub-
level observed for the M nodes can be described as follows:
5. Topological analysis of the average structure each [ScO6]-octahedron is immediately linked to six [SiO4]-
The crystal structure of Cs3ScSi6O15 can be described as a tetrahedra (see Fig. S17 in the supporting information), i.e. the
mixed tetrahedral–octahedral or MT framework, which is PME of a single M node contains six T nodes. According to the
formed from vertex sharing of [TX4]-tetrahedra and [MX6]- classification given by Ilyushin & Blatov (2002) based on the
octahedra. In their review on the crystal chemistry of zircon calculation of the coordination sequences up to k = 3 the
silicates, which are a prominent family of compounds PMEs can be denoted as {6,6,18} or, alternatively, this has also
belonging to this class of materials, Ilyushin & Blatov (2002) been classified as PME type A-1. The PMEs for the tetra-
suggested a classification based on a combination of topolo- hedral T nodes contain three tetrahedra and one octahedron,
gical and geometrical aspects. For the present study we and can be allocated to the {4,4,14} class (see Fig. S17).
focused on the sub-structure of the framework forming cations
114 Clivia Hejny et al. (3+1)-Incommensurately modulated structure of Cs3ScSi6O15 Acta Cryst. (2016). B72, 109–116
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form chains of alternating [ScO6]-[Si6O18]-units. In monoclinic 7. Conclusion
Cs3EuSi6O18, the symmetry of the [Si6O18]-ring is not The structure of Cs3ScSi6O15 forms a mixed tetrahedral–
constrained: the bridging atoms are situated almost within the octahedral framework with very large positional modulation
ring plane [maximum distance of 0.055(4) Å of individual O of the constituting atoms and thus giving rise to a diffraction
atoms from ring plane] and the angles between the normal to pattern composed of main and satellite reflections of
the ring plane and the connecting line between the terminal O remarkable intensity and high order. Structurally related
atoms range from 45.9 (1) to 80.0 (1) . The [ScO6]-[Si6O18]- compounds with very similar chains of alternating [MO6]-
chains run along the a-axis and are interconnected to form a [Si6O18]-units and large alkali cations have been reported:
tetrahedral silicate framework structure consisting of loop- Cs3EuSi6O15 has a different topological connectivity of the
branched vierer double chains with four-, six- and eight- [MO6]-[Si6O18]-chains in comparison to Cs3ScSiO15. The
membered rings. This is different from Cs3ScSi6O15, in which structures of Cs3DySi6O15 and Cs1.86K1.14DySi6O15 have the
tetrahedra within the framework form six-membered rings same topology with identical connections in between the
and ring-shaped formations with other numbers can only be [MO6]-[Si6O18]-chains as found for Cs3ScSiO15. A more thor-
found for rings composed of tetrahedra and octahedra. ough comparison of Cs3ScSi6O15, Cs3DySi6O15 and
In the crystal structure of Cs3DySi6O15 [a = 13.996 (1), c = Cs1.86K1.14DySi6O15 would be facilitated by the description of
7.1775 (6) Å, R3 m1 (Zhao et al., 2010)], the [ScO6]-[Si6O18]- all structures with the same basic structure and their positional
chains are arranged and connected in a very similar way as in modulations, either incommensurate as suspected for
Cs3ScSi6O15. However, the published structure has positional Cs3DySi6O15, or commensurate with a wavevector q = 1/5c*
disorder for Si, O and Cs atoms without further specification for Cs1.86K1.14DySi6O15. It seems likely that the ratio of the
or discussion of the disorder. This leads to the suggestion that ionic radii of Sc, Dy and Eu on the octahedral position to the
Cs3DySi6O15 may have a modulated structure similar to ionic radii of Cs and K is responsible for the presence of a
Cs3ScSi6O15. Another indicator for the possible modulated modulated or an unmodulated structure. However, from the
character of Cs3DySi6O15 is the conspicuously large displace- scarce data available any conclusion about the formation of a
ment ellipsoids with prolate form for some and oblate form for modulated structure, a topologically identical but unmodu-
other atoms. Such unusually large atomic displacement para- lated structure or a structure with different topology is highly
meters are typical for the refinement from only main reflec- speculative and deserves the synthesis of further members in
tions of a modulated structure and hence resulting in atomic this structural family and leaves room for further studies.
parameters averaged over the true atomic positions in the
modulated structure.
Cs1.86K1.14DySi6O15 (hereafter denoted CsKDy) [a =
8. Related literature
13.896 (2), c = 35.623 (7) Å, R32 (Wierzbicka-Wieczorek et al.,
2015)] has recently been published with the same basic References cited in the supporting information include: Chang
topology as Cs3ScSi6O15. In CsKDy, Cs is partially (38%) et al. (2013); Hejny et al. (2012); Sitarz et al. (1998).
exchanged by K. Although Cs/K in CsKDy has a 10- to 11-fold
coordination comparable to the coordination environment of Acknowledgements
Cs in Cs3ScSi6O15, the calculated bond-valence sums of the Cs/
This work was supported by the CEEPUS network (CIII-R0-
K site is 0.74–0.83 and thus indicates an underbonded char-
0038-10-1415) and the Serbian Ministry of Education, Science
acter. This is in contrast to the balanced coordination envir-
and Technological Development (under contract No.
onment of Cs in the (3+1) modulated structure of the title
III45007). The help, advice and quick response to all questions
compound. The main difference between Cs3ScSi6O15 and
concerning the JANA2006 program from M. Dusek and V.
CsKDy is the translational periodicity along the c direction,
Petřı́ček is highly appreciated. The authors express their
which is five times as large in CsKDy in comparison to
gratitude to two anonymous referees.
Cs3ScSi6O15. As in Cs3ScSi6O15, octahedra in CsKDy are
rotated around the 3 -axis. The octahedra in CsKDy occur in
five different rotational positions ( 13.5, 16.2, 19.5 and References
20.7 relative to the octahedra in the origin) along the c Agilent (2012). CrysAlisPRO. Agilent Technologies, Yarnton,
translational period and each sixth DyO6-octahedron is Oxfordshire, UK.
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octahedra with 0.00 rotation relative to each other are Cryst. B58, 364–369.
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